Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02075 ATGTTCATAATCCTTCAATTATACTCCACTCATAGAATCATTCTAGCTTTGAAACTCTCTTATGTGCTATTTCTCTTTTCTTCAATTCCTAGTGCCAAAGGCTACACTGCTAGAGCTCACACCTTCATTTATGCTGGCTGCTCTCAAGAAAAATACCAACCAAACACACCCTTTGGAGCCAACCTCAACTCCTTTCTGTCTTCAGTTTCTGGCTCATCTTCTGACACTTCTTACAATAGCTTTGCCATTGGAAATGGAAGCACATCACCGCCAGAGGGGTCCATATATGGCTTATACCAATGCAGGGCTGATTTGAGGCCAACTGAATGCTCAAAATGTATTCAAAGTTGTCTCAACCAAATAGGCTTGGTTTGTCCCTTGGCACTTGGTGCATCTTTGCAACTTGAAGGCTGTTATGTAAGATATGAGCATGTTGATTTCCTTGGCAAACCTGACACAAGCCTTTGGTACAAGAGGTGCAGCAAAGCAGTGGCAAGTGATGCTGAGTTCTTGAGGCGTAGAGATGATGTTCTTGGTGATTTGCAAGGTGCTAATGGATTTGGAGTGAGTACTTCAGGTTTTGTTGAAGGGTTCGCACTGTGTTTGGGAGATTTAAGTGTTGCTGATTGCTCCTCTTGCCTTCAAGAAGCAGTTGCAAAGGTTAGGAGTGTGTGTGGATCAGCAGCATCAGCTGATGTGTTCTTGGCACAATGTTATGCTAGGTATTGGGAAGCTGGCTACTATGATGAAGCAGAATCTTCCAACGAGGAAGACCAAGTGGGAAAATCAGTGGCCATTATTGTGGGAGTACTTGCAGGTCTAGCCATTCTAGTTGTCCTTCTCTCAATATGCCGAAGAGCAATGGGTTAA 870 0.4368 MFIILQLYSTHRIILALKLSYVLFLFSSIPSAKGYTARAHTFIYAGCSQEKYQPNTPFGANLNSFLSSVSGSSSDTSYNSFAIGNGSTSPPEGSIYGLYQCRADLRPTECSKCIQSCLNQIGLVCPLALGASLQLEGCYVRYEHVDFLGKPDTSLWYKRCSKAVASDAEFLRRRDDVLGDLQGANGFGVSTSGFVEGFALCLGDLSVADCSSCLQEAVAKVRSVCGSAASADVFLAQCYARYWEAGYYDEAESSNEEDQVGKSVAIIVGVLAGLAILVVLLSICRRAMG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02075 289 ProSiteProfiles Gnk2-homologous domain profile. 149 247 IPR002902 -
Cca01g02075 289 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 15 288 - -
Cca01g02075 289 PANTHER PLASMODESMATA-LOCATED PROTEIN 8 15 288 - -
Cca01g02075 289 Gene3D - 154 245 IPR038408 -
Cca01g02075 289 Gene3D - 39 147 IPR038408 -
Cca01g02075 289 Pfam Salt stress response/antifungal 47 144 IPR002902 -
Cca01g02075 289 Pfam Salt stress response/antifungal 165 242 IPR002902 -
Cca01g02075 289 ProSiteProfiles Gnk2-homologous domain profile. 40 147 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02075 Cca-Chr1 48058409 48061106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02075 94 282 Receptor kinase-like Gene Family AT5G40380 27.604 8.23e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02075 - - gmx:100809227 494.967