Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02073 ATGAGGGATCCCAATCTGGAGCTGCAGGAATCCGGTTGGGAGGAGCTGCGCAAGGAAGCGCGCAAGATCGAGGGCGATCTCGACGTCAAGCTCTCTTCCTACGCCAAACTCGGCGCTCGCTTCACCCAAGGAGGAGGTTATGTGGATAGCGGTTCACCACCTATTGGGTCCAGTAGTAGGTCTTGGAAGTCCATGGAAATGGAAATTCAGTCTTTGCTTGAGAAGCTGTTGGACATAAATGATTCAATGAGTCGATGTGCTGCATCTGCTGGACCAGCTACTTCTGTGACTCAAAAGTTGGCTAGGCACAGAGACATTCTTCATGAGTTTACCCAGGAATTTAGGCGTATCAAGGGGAACATAAACTCAATGAAGGAACATGCGGAGCTTTTGAGTTCTGTCAGGGATGATATTACTGACTTCAAGACATCAGGCAGTATGTCACCGAGGATGCAGTTACTACGTGAGAGAGCTGCTATCCATGGAAATATATCTCATATAGATGATGTGATTAGTCAAGCTCAAGCAACAAGATCTGTGTTGGGTTCTCAGAGACAATTGTTTGGTGATGTTCAAGGAAAAGTGAAGGTTCTTGGTGACAAGTTTCCCATCATTCGTAGCCTTCTTGGTTCAATAAGAAGGCGGCGCTCAAGGGATACTCTTATCCTGTCAGCGGTGATTGCTGCTTGTACGTTGTTTATCATCATTTATTGGCTCTCAAAGTAA 726 0.4628 MRDPNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGGYVDSGSPPIGSSSRSWKSMEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSMKEHAELLSSVRDDITDFKTSGSMSPRMQLLRERAAIHGNISHIDDVISQAQATRSVLGSQRQLFGDVQGKVKVLGDKFPIIRSLLGSIRRRRSRDTLILSAVIAACTLFIIIYWLSK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02073 241 PIRSF Golgi_SNARE 7 240 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Cca01g02073 241 PANTHER GOS-28 SNARE- RELATED 4 241 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Cca01g02073 241 Pfam Snare region anchored in the vesicle membrane C-terminus 152 216 - -
Cca01g02073 241 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1-2 4 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02073 Cca-Chr1 48000768 48009649 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02073 K08495 - gmx:100781813 422.55