Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02055 ATGGTGAAACCGAAACCGAATCAAAGTAGCAACAGCATAGAACAATCGAAAATGGCGAAACACGAAACTTCCGATTCCGAATCCTCGGGTTCAGGGTCCGAGGAGGCACGAAGCGTGGGCAATGGGAAGAAGGGCGTGTCGGAGTACGAGAAACAGAGGCTCTCGAGAATCGCGGAGAACAGAGCCAGATTGGAGGCTCTGGGTTTGCCCCAAATGGCTTCTTCGTTGAAAGCTTCGCAGCCTCACAAGGGAAAAGAGAAGAACGTTAAAGATGAAGATGACGAAGAGTATGTACCCGAAGACGATGAAGGCGAACCCGGTTCAAGTTCTTCAAGTGAACACGATGAGGACCATAAAGATGAGGACTTTGCTATCGGAAATGCTTCTGGGTCACGCAAAAGGAAGGTGAAGAACAAGGGTTTGAAAAAGAAAGCGGGAGTCTCTAGGAAGAAGCATGTAAGAAATTCAGAGTGCATTAATTATGATGATGACGAAGCTTTGAGGCAGGCAATTGCTCTTTCCTTGCAAGACTCTGCAGAATGTTCATATTCACCTGACAAGAATGCAATGAACATTAGCAAGACTGAGAAAAAGGGGAACAATCACATTCTAGAAGATAAGGGAAGAAAGAAGAACAAAAAATCGTTTGCCAGTCGGCTGCAACTGACCGAGGATGAGCTCATTCTAAACTTCTTCCAGCTTGATGAAGCAGGCAAAGGTACTGTAAATGTGGGGGATTTACAAAGGGCAGCTACAGCTCATGATTTTTTATGGACAGACAAGGAGTTGGTTGATATGATTCGCTACTTCGATAGTGATGGAGATGGAAAGCTAAGCCTCGATGATTTCCGGAAGATTGTTGTTCGTTGCAACATGATTAAAGGGTCTTGA 891 0.4512 MVKPKPNQSSNSIEQSKMAKHETSDSESSGSGSEEARSVGNGKKGVSEYEKQRLSRIAENRARLEALGLPQMASSLKASQPHKGKEKNVKDEDDEEYVPEDDEGEPGSSSSSEHDEDHKDEDFAIGNASGSRKRKVKNKGLKKKAGVSRKKHVRNSECINYDDDEALRQAIALSLQDSAECSYSPDKNAMNISKTEKKGNNHILEDKGRKKNKKSFASRLQLTEDELILNFFQLDEAGKGTVNVGDLQRAATAHDFLWTDKELVDMIRYFDSDGDGKLSLDDFRKIVVRCNMIKGS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02055 296 CDD EFh 234 287 IPR002048 GO:0005509
Cca01g02055 296 Gene3D - 178 294 - -
Cca01g02055 296 MobiDBLite consensus disorder prediction 68 153 - -
Cca01g02055 296 MobiDBLite consensus disorder prediction 186 210 - -
Cca01g02055 296 MobiDBLite consensus disorder prediction 107 128 - -
Cca01g02055 296 ProSitePatterns EF-hand calcium-binding domain. 271 283 IPR018247 -
Cca01g02055 296 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 162 180 IPR003903 -
Cca01g02055 296 SUPERFAMILY EF-hand 216 290 IPR011992 -
Cca01g02055 296 MobiDBLite consensus disorder prediction 1 54 - -
Cca01g02055 296 SMART efh_1 262 290 IPR002048 GO:0005509
Cca01g02055 296 MobiDBLite consensus disorder prediction 1 17 - -
Cca01g02055 296 MobiDBLite consensus disorder prediction 132 150 - -
Cca01g02055 296 Pfam EF-hand domain pair 230 287 IPR002048 GO:0005509
Cca01g02055 296 ProSiteProfiles EF-hand calcium-binding domain profile. 258 293 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02055 43 296 EF-hand Containing Proteins AT1G73440 42.023 3.87e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02055 - - gmx:100806103 352.443