Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02047 ATGGCCATCTCAAACACTCATGCTCTTGTCTTGGCTTCACCAGGAATGGGTCACATAACCCCTGCCCTAGCCCTAGCCAAGCACCTAGTCACTCACCAAATCACTCCCAAACTCACCTTCATTTATGGCACAATCAAAACATCCACTCCCTCCAAAGCTGAGACCCAACTTCTTCAACTAGCCATGAAGGAGAACCTCTTTGACCTAATCTCACTCCCCCCACTTGACCTCACAACCCTAGTTGGCCCTCATGCCTCTGTAGAAACCAAAATAGCAACCATAATGCATGAAATCCCACCACTCTTTGTGTCCACAATCTCCACCATGAACCTCAACCCAACCATCATCATCATGGACTTCTACTTAAGCCAAGTCATACCTCTAGCTAAAAACCTAAAAGCACCCAAATTTTCTTTTGCCACAACTAATGCATGGCTCCTAGCACTTGCTCTTCACACCCCCACTTTGGATAAAGAAATACAAGGGGAATATGTCAATGATGAAAACATACCAATCTCAATCCCGGGTTGCAAACCCATATACCCCCATGATTTGTACGACATGTTGAAAGACAGGACACATAGGTTGTACCATGAATTTGTTGGTGCATGTGAGGGGGCATCACTGGCTGATGGGGTTTTTGTGAACACTTTTGGTGAGCTAGAACCTAGGACACTCGAAGCACTTGGTGGGAGTGGACACATCACGAAGGTGCCCGTGTACCCAATTGGGCCAATTGTGAGGGACAGAGACCCAAATGTTGATGAGAGAAGGAGAAGTGATGTTGTTGAGTGGCTAGATACACAAGAAGAAGATTCAGTGGTGCTTGTGTCACTTGGGAGTGGATATGCAATGACATTTGAGCAAATCAAAGAGATGGCATTGGGGTTGGAGCTAAGTGGAAAAAAATTTGTTTGGGCTGTTCGTCCTCCTATTACCAAAGCCGGCAATGAGCACTATTTCACAGCAGGTGAGAAAAGTGAAACCGGAACCACCGTAGCATCAAATCCTTTTCCTGAAGAGTTCTACCGCGTACAAAGCAATGGATTAGTGATCACAGATTGGGCACCACAAATGGATATATTGAAGCATCCCTCAATTGGTGCATTTGTGTCTCACTGTGGATGGAACTCAGTGATAGAGAGTGTTTCATGTGGGGTTCCCATAATTGGATGGCCTCTCTATGCAGAGCAAATGATGAATGCCACAATGCTAGCAGAAGAAGTTGGCAATTCAATTCGAGTGAAGGTGTCACCATCTACCAACATGGTTGGAAAGGAAGAGCTAGCAAAAGTAATAAGGAAGATAATGGATATGGATGATAAAGAAGGGTGTGTGATTAGGGCAAAGGCTAAAGAGCTTAAACGCTTGGCTCAAAGAGCATGGTCTCGTGATGGTTCTTCTTATCTTGCACTTTCAACAATCTTTCTTTCCAATGATGTGTGA 1446 0.4481 MAISNTHALVLASPGMGHITPALALAKHLVTHQITPKLTFIYGTIKTSTPSKAETQLLQLAMKENLFDLISLPPLDLTTLVGPHASVETKIATIMHEIPPLFVSTISTMNLNPTIIIMDFYLSQVIPLAKNLKAPKFSFATTNAWLLALALHTPTLDKEIQGEYVNDENIPISIPGCKPIYPHDLYDMLKDRTHRLYHEFVGACEGASLADGVFVNTFGELEPRTLEALGGSGHITKVPVYPIGPIVRDRDPNVDERRRSDVVEWLDTQEEDSVVLVSLGSGYAMTFEQIKEMALGLELSGKKFVWAVRPPITKAGNEHYFTAGEKSETGTTVASNPFPEEFYRVQSNGLVITDWAPQMDILKHPSIGAFVSHCGWNSVIESVSCGVPIIGWPLYAEQMMNATMLAEEVGNSIRVKVSPSTNMVGKEELAKVIRKIMDMDDKEGCVIRAKAKELKRLAQRAWSRDGSSYLALSTIFLSNDV 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02047 481 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 262 436 IPR002213 GO:0008194
Cca01g02047 481 PANTHER GLYCOSYLTRANSFERASE 4 474 - -
Cca01g02047 481 CDD GT1_Gtf-like 7 461 IPR002213 GO:0008194
Cca01g02047 481 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 472 - -
Cca01g02047 481 Gene3D Glycogen Phosphorylase B; 7 468 - -
Cca01g02047 481 PANTHER UDP-GLYCOSYLTRANSFERASE 72E1 4 474 - -
Cca01g02047 481 ProSitePatterns UDP-glycosyltransferases signature. 355 398 IPR035595 -
Cca01g02047 481 Gene3D Glycogen Phosphorylase B; 260 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02047 Cca-Chr1 47575004 47582480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02047 7 472 Glycosyltransferase AT2G18570 42.675 4.92e-127 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02047 K12356 - gmx:100807691 707.212