Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02046 ATGGCTCACCACCAACTCATCGACACGCTCACCTCCCACATCTCCCTCTACCACTCCCAATTCCCAaaccctaaccctaaccctaaccctaGATCATCCATCCTCAAATGGTTCTCCTCGCTTTCTCTGCACCACCGCCAGGCCTACCTCACCGTCGTCGACGCCGCCTTCGTCCAGATCCTCCTCCGCATGCTCGCCAAGCTCCGATCGCACGGCCACGGCTCCTTCATCCTCCTCCCCGACCTCCCCCACCGCGACCTGCCCACACTCTGCTTCAAGAAATCGCGCGGCCTCCTCGCGCGCCTCGCCGACTCCGACGCCGCCGCCCGCCTCCTCTTCGACTCCGTCCGCCTGTTCGACCGCCCCTCGGCGGGGCGGCTCGACGCGGTGACACTCGCTGAGGGGCTAGTTGGGGACGTGGACCGGTTCGTGGACGCCATGGACCGGATCACTGGCGGTGGGTTCCTCCGCGGCGAGGAGGCCGAGCTCGGGGAGGATTGGGCGGAGCTGCATTGGCTCAAGGCGAAGGGGTACTATGGCGTCGAGGCGTTTATTGCGAACAGGGTTGAGGTTTCGATGAGGTTGGCGTGGCTGAACTGCAGTGGGGGGAGGAAGAGGGGAGTGAAGTTGAAGGAGAAGTTGAGTGCGGCGGGGGTGGGAGTGAATGTGTTTTGGAGGAAGAAGGGGTGTGTGGATTGGTGGGGGAATTTGGATGCTGGGACCAGGAAGAAGGTGTTTTCCACCTTCGTCATGAAAGCTGCAAAACCTTTGACTCGTGAGGTTTTGGAAGTGGCAAGCAGTGCCTCTGATGATGAGATTTGGCTATACAGTATGGGAGTGGATAAATTACAGCAACATAATCGTCCTATGTCAGCTCAACAGACCAACCAAGATCTTTCTGCCGATTTGGAATTTGGAACAGTTATTTCACCAGTCACTTTTTGTAAAAAACCTGCTGCTTTAGTCAGAGCCTTTTATTCTTTATTTGTACTTCTTGATGTTAATATGATGGTAACATCAAATCTTAATAGTGAATATGATGTAGGAAAGCTTTTCTTTAGTTCATTGGGTTCTGTCTGTACGATATCTGATTGTATATTAAGAAAACTGCGAGGATTTCTGATGGTTATTTCACTTGAATGCACAAAACTTGAACTATTAGGAGAGGAACATAACAGGTCTTCTTCAGATAAACCTAAAGAAAAGCTTGGTGTTTCTAACCGTAAAAAGAAGGGACGAAACCGAAATACTAAAAGGCAAAATCCTGTTTCAAAGACATGCGTGGATGATATTTCACCTGAAAATCTACTCAAGGACATCGATTGTGTAGGGGATAATAAAAATAAGACTGATTTAGTGGGATCCAGGGAACCTCCTGCTGTTCATATGGGGAAGGGGATTTCGATGGACTGCTCATCACCAACTGTAAAAATGGATCATACTCAAGGATTGGATGTTGGCAAAGTACGAACCACTCCAAGAAGAAGTAGAAAAGAGAAAATTAGAAGTAAAAACATTGTCATTGATAGTGCAAGTGGAGATGCTCAAAAGTCAACTGTGCACGCTGCCTCTACCACTGTTATTTCTGAAGGTGAGGTGGCAATATGTGATAAGTTTTTAGATAGTTCTACCATTCAGAATGTCAAAAATGACAATTCAATTGGTAATGACATCCTTGCTTCAAATTCAAGCCTTTGTAGCTCTCTTAGTGGGCTTACTAAGGAGAACAGTTCTACAAAGAAAGTTGAAGGAGAGACTGAAGATCTTGCTGAAAGTGGGAATAGTTTAGGTTCTCAGCATTGTTTGTTGTCAGATGAAAGGAAAACTTTATGTTCTGGATTAGATACTTTAACTTGCGATGTATATTCTAATGCTGCTATAACTCCTCCTTTACCTGCATTGAAACATGGTAGTTTCTTCAGCAAGGAAGATACATGTCCTTTGAATTCTTCGTGTGCTGTCAAAGCTGATATAAAGTCAGCTGTTCTTGACAAACCAATTAGAGAAGTTAATAAAAAAGAATTTGGGATGTTGAAGGAGCATGATCAATATCTATTTGAAAGTAGAAATACAGCTTTCTCAAAGTGCAGCCCATATGAGTGGCCTGGTGTACCTTCTATATATTTTCCATCTTTTAACTCACATCTCCCTCCTGCCACAGATAGATTACATCTGGATGTTGGGCGAAATTGGCATAATCACTTCTGCCACCCATTTGTTCCCACCTTACAGCAGGCAAGGAATCCTCCTATTGAAGGTGGATGCAACCCAATCCTGTCGCGTCCTATTCCTATGAGTTTCGACTGGCCCCCAGTTTTTCGTGGTGGCATGACCCCATCACCAAACTATAATTATGACTCTGGGTTTATATCTAGGCAGCAATGTACCTTTTCAAAAGGGTTGGCTGTTCACAGCATGCAGGTTGATGTGACTGCTCCTGATGATGAAAGAAAATATTCTGGGGATGTATGGGATTTGCCTGATCTAACGAATACATTAGAACTAGCAGATGAATTTGACAGTCACTGTGTATCTGAGGAGGAGTATGAGGTTCATACTGTTTCTGGTATAGATTATAATCAATATTTTGGTGGAGGAATAATGTATTGGAACCCTTCTGATTATCCAGGGAAAGGTTTCTCCCGGCCTCCCTCACTTAGCTCTGATGACAGTTTATGGGCTTTGCGTGAAGCTGACATGAATAGGACAGTAGATGACATGGTTGCTTTCTCATCTTCGTATAGTACAAATGGTTTAACCTCACCCACTGCTGCTACATTTTGTTCTCCTTTCGATCCTGTAGGGACTGGGACCCAGACAGTTGGTTATGTGATGTCAGGCAATGAAGTACCTGGAAAGATGTTGCATTCTTCGTCAGTTACAGATGCAGCAGTGGATGAAGATACCTCTGGTTCTTTGGGTAATAATTTGCCTGGAGAAGTTGAAGGAAAGGCTGGCGATTCACATCAATATCCCATTCTACGGCCAATAATTATTCCTAACTTGTCAAGGGAAAGGTTTGATCATAAAAGCCCCTGTGTTCCTCCCACCAGGCGGGAGCAGCCTCGCATAAAGCGGCCACCATCACCTGTAGTGCTTTGTGTCCCACGTGCACCACGTCCACCCCCACCCTCCCCTGTGAGTGACTCCAGGAAACACAGGGGTTTTCCAACGGTTAGATCTGGTAGTTCCAGCCCAAGGCACTGGGGAATGAGAGGCTGGTATCATGATGGGAATAATTTGGAGGAAGCATGTTTGAGAATGGATGGTGCTGAAGTTGTGTGGCCTTGGAGAAGTAATAATCTTGCGGTGCGACCTTTGATTCAGCCTTTACCTGCTGCCTTGCTGCAGGACCGCTTGATTGCATTGTCACAGATAGCACGTGACCAGGAACATCCAGATGTCACCTTTCCTTTGCAACCTCCTGAGTTACAAAGCTGTTCTGCACAGAATGCTTCTTTATCTTTGATGCATGGCATTCTCCATGATGAGATTGACTCTTTCTGTAAACAGGTTGCTGCAGAAATTATGGCCAGAAGGCCTTACATTAATTGGGCTGTCAAGAAAGTTACCCGATCCCTGCAGGTTCTGTGGCCCAGATCCCGGACAAACTTATTTGGTTCAAATGCAACTGGTATGTCCCTTCCAACAAGTGATGTTGACCTTGTGGTTTGTCTCCCTCCAGTGAGGAACCTGGAACCTATTAAAGAAGCTGGAATACTGGAAGGTCGTAATGGAATTAAAGAAACCTGTCTTCAGCATGCAGCTAGGTATCTTGCCAATCAGGATTGGGTGAAAAATGATTCTCTGAAGACAGTGGAAAATACAGCTATTCCTATTATTATGCTTGTGGTGGAAGTACCTCAGGATGTTATTACTTCATCGCCTCCTATGATGCAGTCATTAAATGAAGAGCCACAGTGTACTCCTGGTGAACATGGTAATGACAATCATGCTGATACCATCCAGTTAGAAGATTCGGCTATGCAAAAAGGCTCCCAAATGAAATTTGATGCCTTGAAATCAAAATCAATTCGTCTGGACATCAGTTTTAAGTCCCCGTCACATACTGGACTCCAAACTACAGCAATGGTTAAGGAGTTGACAGAGCAATTTCCTGCTGCTATACCTCTTGCCTTGGTACTAAAACAGTTTTTGGCTGATCGGAGCCTTGATCAATCCTACTCTGGTGGCTTAAGTTCCTACTGTTTGGTCCTACTAATTATACGATTTCTTCAACATGAGCACCATCTTGGCCGGCCCATCAACCAAAATTATGGAAGCCTTCTGATGGATTTTCTTTACTTTTTTGGGAATGTGTTTGATCCTCGCCAAATGCGGATATCAGTTCAGGGAAGTGGACTTTATATAAAAAGAGAAAGAGGTTGTAGCATTGATCCAATTCACATAGATGATCCGCTTTTTCCATCTAATAATGTGGGAAGGAATTGCTTCCGGATACATCAATGTATTAAGGCATTTTCAGAAGCTTATTCTGTTCTTGAAAATGAACTCAAATTCCTAAATAGTGATGATTCTCCCTACATCAAGACTGAAATGTTATGTTTTCTAAAGGTTCCTGGCTTGTGCGAAGTTGTGCATGGAAAAATATGGTCTGTTACTCTGGTCATGCGGAGTATACATGGAAGCTGTTCACTAACTGATTGCTGGCAGTCCGAATGGTGGGTGTGGAAGTTGGACAACCACTGGTTGGTTTGA 4719 0.4478 MAHHQLIDTLTSHISLYHSQFPNPNPNPNPRSSILKWFSSLSLHHRQAYLTVVDAAFVQILLRMLAKLRSHGHGSFILLPDLPHRDLPTLCFKKSRGLLARLADSDAAARLLFDSVRLFDRPSAGRLDAVTLAEGLVGDVDRFVDAMDRITGGGFLRGEEAELGEDWAELHWLKAKGYYGVEAFIANRVEVSMRLAWLNCSGGRKRGVKLKEKLSAAGVGVNVFWRKKGCVDWWGNLDAGTRKKVFSTFVMKAAKPLTREVLEVASSASDDEIWLYSMGVDKLQQHNRPMSAQQTNQDLSADLEFGTVISPVTFCKKPAALVRAFYSLFVLLDVNMMVTSNLNSEYDVGKLFFSSLGSVCTISDCILRKLRGFLMVISLECTKLELLGEEHNRSSSDKPKEKLGVSNRKKKGRNRNTKRQNPVSKTCVDDISPENLLKDIDCVGDNKNKTDLVGSREPPAVHMGKGISMDCSSPTVKMDHTQGLDVGKVRTTPRRSRKEKIRSKNIVIDSASGDAQKSTVHAASTTVISEGEVAICDKFLDSSTIQNVKNDNSIGNDILASNSSLCSSLSGLTKENSSTKKVEGETEDLAESGNSLGSQHCLLSDERKTLCSGLDTLTCDVYSNAAITPPLPALKHGSFFSKEDTCPLNSSCAVKADIKSAVLDKPIREVNKKEFGMLKEHDQYLFESRNTAFSKCSPYEWPGVPSIYFPSFNSHLPPATDRLHLDVGRNWHNHFCHPFVPTLQQARNPPIEGGCNPILSRPIPMSFDWPPVFRGGMTPSPNYNYDSGFISRQQCTFSKGLAVHSMQVDVTAPDDERKYSGDVWDLPDLTNTLELADEFDSHCVSEEEYEVHTVSGIDYNQYFGGGIMYWNPSDYPGKGFSRPPSLSSDDSLWALREADMNRTVDDMVAFSSSYSTNGLTSPTAATFCSPFDPVGTGTQTVGYVMSGNEVPGKMLHSSSVTDAAVDEDTSGSLGNNLPGEVEGKAGDSHQYPILRPIIIPNLSRERFDHKSPCVPPTRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSDSRKHRGFPTVRSGSSSPRHWGMRGWYHDGNNLEEACLRMDGAEVVWPWRSNNLAVRPLIQPLPAALLQDRLIALSQIARDQEHPDVTFPLQPPELQSCSAQNASLSLMHGILHDEIDSFCKQVAAEIMARRPYINWAVKKVTRSLQVLWPRSRTNLFGSNATGMSLPTSDVDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKNDSLKTVENTAIPIIMLVVEVPQDVITSSPPMMQSLNEEPQCTPGEHGNDNHADTIQLEDSAMQKGSQMKFDALKSKSIRLDISFKSPSHTGLQTTAMVKELTEQFPAAIPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSGLYIKRERGCSIDPIHIDDPLFPSNNVGRNCFRIHQCIKAFSEAYSVLENELKFLNSDDSPYIKTEMLCFLKVPGLCEVVHGKIWSVTLVMRSIHGSCSLTDCWQSEWWVWKLDNHWLV 1572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02046 1572 Gene3D - 1330 1520 - -
Cca01g02046 1572 MobiDBLite consensus disorder prediction 390 428 - -
Cca01g02046 1572 PANTHER NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN 650 1517 - -
Cca01g02046 1572 Gene3D Beta Polymerase, domain 2 1178 1292 IPR043519 -
Cca01g02046 1572 Pfam Nucleotidyltransferase domain 1187 1231 IPR002934 GO:0016779
Cca01g02046 1572 SUPERFAMILY PAP/OAS1 substrate-binding domain 1373 1506 - -
Cca01g02046 1572 MobiDBLite consensus disorder prediction 1008 1025 - -
Cca01g02046 1572 MobiDBLite consensus disorder prediction 390 404 - -
Cca01g02046 1572 SUPERFAMILY Nucleotidyltransferase 1163 1368 IPR043519 -
Cca01g02046 1572 Coils Coil 1491 1511 - -
Cca01g02046 1572 PANTHER POLY(A) RNA POLYMERASE 650 1517 IPR045862 GO:0004652|GO:0031499|GO:0043631
Cca01g02046 1572 MobiDBLite consensus disorder prediction 1008 1064 - -
Cca01g02046 1572 MobiDBLite consensus disorder prediction 1032 1048 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02046 - - ccaj:109818618 2497.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02046 01 47540852 47555414 Cca01g02046 01 47540852 47555414 ECH