Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02039 ATGGcttctttttcttctgcttcttcttctCTGACAATATCACCAAGGAAGCTGCGCTATGATCTATATTCCTATTCATACAAAGAAGATTCCAACACCCCTTTAGTGATAAACGTTCTGGCTTCACTAATTGAGAGGAGCATGGCCAGGACACAGAGGATTGTGAAGAATTGTTCCAATGCTTTGTCCAAAGCCATAAGCACAAACATCTTTGATTGTAGGGAGATTCCTGATATGACCATTCAGTCCTATCTAGAGAGAATTTTCAGGTACACTAGAGCAGGACCATCAGTGTATGTTGTGGCCTATGTCTATATTGACAGGTTCTGCCAAAACAATCCTAGCTTTAGGATCAATGCCAGAAATGTCCATAGGCTTCTCATAACAACTATTATGGTGGCTTCCAAGTATGTGGAAGATATGAATTTCAGAAACTCATACTTTGCAAGAGTTGGTGGATTGACAACAAATGAATTGAATGAGTTGGAGCTTGAATTTCTTTTCTTGATGGGTTTTAAATTGCATGTGAATGTGAGTGTGTTTGAGAGCTATTGCTGCCATTTGGAGAGGGAAGTTAGCATTGGAGGAGGGTACCACATTGAGAGGACCCTAAGGTGTGCTGAAGAGATCAAAGCAAGGCATGTAGAAGAAAGGGGTTACACACAAATTGCACGTCTAATGTTGTAG 687 0.393 MASFSSASSSLTISPRKLRYDLYSYSYKEDSNTPLVINVLASLIERSMARTQRIVKNCSNALSKAISTNIFDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPSFRINARNVHRLLITTIMVASKYVEDMNFRNSYFARVGGLTTNELNELELEFLFLMGFKLHVNVSVFESYCCHLEREVSIGGGYHIERTLRCAEEIKARHVEERGYTQIARLML 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02039 228 Gene3D - 25 222 - -
Cca01g02039 228 PIRSF PREG 10 225 IPR012389 -
Cca01g02039 228 PANTHER CYCLIN 12 227 - -
Cca01g02039 228 Pfam Cyclin 62 174 IPR013922 GO:0000079|GO:0019901
Cca01g02039 228 SUPERFAMILY Cyclin-like 83 175 IPR036915 -
Cca01g02039 228 PANTHER UNCHARACTERIZED 12 227 IPR013922 GO:0000079|GO:0019901
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02039 Cca-Chr1 47406257 47407840 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02039 - - gmx:100775375 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02039 01 47406257 47407840 Cca01g02039 01 47406257 47407840 ECH