Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02036 ATGAACCAAAATCTTATTACAAAGAGAAACGAGATTTACCCGTTTGAACGAAATTCTATATTACCGGCGAGTATTCCTCTCTCAATCTGCGACACCGACGAACCTCACTCACCGGAATTTCGCATTCAGAAAATGGCTTTAGGTGGTGGAACAGCTCCCCAAAGAGGAAGTGCAGCGGCTACTGCAAGCATGAGGAGAAGGAGAACAACCGGTGGTGGGGCCTCTGGAGGAGCAGCTGGAACTATGCTCCAATTTTACACCGATGATGCCCCTGGACTCAAGATTTCCCCTAATGTGGTCCTTGTAATGAGCATTGGCTTCATAGCATTTGTTGCCATCCTTCATGTGATGGGCAAGCTGTATTTCGTGCTTTCAACCTCTCTGGCTTCTCTCAGTTTCTTATTCTTAGCCACCAACTCTTTGTTTTCTTTCAAAAAAACACTGTGTCACCCCACTTGGAAAAATACTCAAAGCTTCTGCTCCTCTGAGTGCAATGATCACCATTCCTCCTTGGAAATTCTGAACTTTGAAAAGCAGAAACAAATGGAATTGCAGTGCTTTTGTAAGGGAATAGTAGCTTTCTGCGAAATTCATGAAGAGCTCCACTGA 609 0.445 MNQNLITKRNEIYPFERNSILPASIPLSICDTDEPHSPEFRIQKMALGGGTAPQRGSAAATASMRRRRTTGGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVLSTSLASLSFLFLATNSLFSFKKTLCHPTWKNTQSFCSSECNDHHSSLEILNFEKQKQMELQCFCKGIVAFCEIHEELH 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02036 202 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA 49 123 - -
Cca01g02036 202 PANTHER SEC61 SUBUNIT BETA 49 123 IPR030671 GO:0005784|GO:0006886
Cca01g02036 202 MobiDBLite consensus disorder prediction 49 75 - -
Cca01g02036 202 Pfam Sec61beta family 79 118 IPR016482 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02036 Cca-Chr1 47346531 47351432 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02036 K09481 - csv:101220008 110.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02036 01 47346531 47351432 Cca01g02036 01 47346531 47351432 ECH