Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02019 ATGGGAATCAATTCTCAAGCACTCCCCTCTTGCCGTATGCCCATTACGCTGAACGACTCTCGCAGCGGAGCCCCTCAACAGCCCAACAAGATTATCTGGTGGCGGAATGGGAAGAGAGTTCTCGGTGGAATGGACAGCAATGTAGATTGCTCTTCACTGGCTCAAAACTCTAGTAGGAAAAAAATGTTTCATGATATGAAAGTTGATGGTTATATGCCAAAACAGACCACTTTGTGTGTTTTAATGCTATATTACACAGAGAATGGCCTCTTTCCTCAGGCACAGCCTATATGGGAGCAGCTCCTAAATAGTTCCTTTGTGCCTTCTGTTCAATTCATTTCAAAATTATTTGATGCTTATGCAAAATATGGGAAATTCAAGGAAGTGATCAATTTCCTACGTTATGTGGATATGAGGAATTTCAGTATATTACCTGATGTTTATGCATTGGCTATCTTTTGTTTTGGAAGAGAAGGACAGCTTGAGTTGATGGAAGATATGGCAAAGGAAATGGCTTCAAGAGGTTTCCATGTCTGTTCTAGGACTGCTAATGCTTTCCTTATGTATTGTAGTATTTTTGGTTCTTTGAAAGAGATGGAGAATGCGTATGGCCGCCTTAAGAAATCTAAATTTCTGTTAAAGGAGGAAGCAATTCGGGCCATGGCCTCTGCATATATAAAGGAGAGAAAATTCTATGAATTGGGTGAATTTCTTAGAGATGTGGGTCTAGGTAGGAAAAATGTAGGAAGCCTTTTATGGAACCTTATGTTACTTTCTTATGCTGCCAATTTCAAAATGAAAAGCTTGCAGAGAGAATTTATTAAAATGGTGGAATCTGGGTTCCGTCCTGATATTACGACCTTTAATATCCGCGCTCTAGCCTTCTCAAGGATGGCTTTGTTCTGGGACCTCCACCTTAGCATTGAACATATGGAACATGAAAATGTCATTCCTGATCTAGTTACTTTTGGGTGTGTAGTTGATGCATACTTGGATAGAAGGCTTGGGAGGAACTTGGACTTTGCTCTGAACAAAATGAACTTGGATGATTCTCCACAATTGTTGACAGATCCGTTTGTATATGAGGCCTTAGGTAAAGGGGACTTTCAAATGAGTTCTGAAGCATTTTTTGAGTTCAAGACACAAAGGCAATGGACTTACCGTGTTTTGATACAAAAGTATCTCAAGAAACATTATCGAAGGAACCAGATATTTTGGAACTACTAA 1227 0.3969 MGINSQALPSCRMPITLNDSRSGAPQQPNKIIWWRNGKRVLGGMDSNVDCSSLAQNSSRKKMFHDMKVDGYMPKQTTLCVLMLYYTENGLFPQAQPIWEQLLNSSFVPSVQFISKLFDAYAKYGKFKEVINFLRYVDMRNFSILPDVYALAIFCFGREGQLELMEDMAKEMASRGFHVCSRTANAFLMYCSIFGSLKEMENAYGRLKKSKFLLKEEAIRAMASAYIKERKFYELGEFLRDVGLGRKNVGSLLWNLMLLSYAANFKMKSLQREFIKMVESGFRPDITTFNIRALAFSRMALFWDLHLSIEHMEHENVIPDLVTFGCVVDAYLDRRLGRNLDFALNKMNLDDSPQLLTDPFVYEALGKGDFQMSSEAFFEFKTQRQWTYRVLIQKYLKKHYRRNQIFWNY 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02019 408 PANTHER OS08G0520200 PROTEIN 15 408 - -
Cca01g02019 408 Gene3D Tetratricopeptide repeat domain 246 344 IPR011990 GO:0005515
Cca01g02019 408 PANTHER OS08G0520200 PROTEIN 15 408 - -
Cca01g02019 408 Coils Coil 196 216 - -
Cca01g02019 408 Gene3D Tetratricopeptide repeat domain 50 241 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02019 61 397 Glycosyltransferase AT1G05670 23.276 1.63e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02019 - - gmx:100818684 701.819