Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02018 ATGAGAAAATCCACCAGACTCTCCGCCATCGGCCTCGCCCAAGCTCCAGAACCGGTGAAGCCTTTCAGCACTCGATTTTCCCTGCGGGCGTACGCGAAGCGCGTGCAACAGCTCACACCGGAGCAGAGATCCGCGATTTCGCGAACCGGCTTCGGGAACCTTCTGTCGGTTCCGAACCACACGCTGAACAAGGTGTTCCTGACGGAGCTGATGGACGCGTGGAGCTGCGACCGCCGCGCGTTCGCGCTCCGCTCCGGCGGCGAAATCGGGATGACGCCGTTGGACGTGGCTCTGATCCTGGGACTTCCGGTTGCCGGTAACCCCGTGAATTTGTCGGAGGACGAACCGTTATCCGATTTGGAAGAGTTGTATGGCGCCACGAAAGCGAAGAGGAAGGTGGCCATGGCTTTTCTGGAGAATCGGCTCGAGTTGATTGGTGATGTTGCGAGCGATGATTTCGTTAGGAGCTTTCTGCTCTATACAATTGGGACGTTTCTCTCTTCAAACGATGGGAAGGTGGATTCGCGGTTTTTGCGGTTTCTGGAGGATTTGGGGGAGGTTTCGGGATTTGCTTGGGGTGGTGTTGTGGTTGATGATTTGTGTTACTGGTTGGATAAGAGGAAGGAGCATAATGTGCAGTATGTGGGTGGTTGTCTTATTTTTCTCCAGACATGGTCCTATGAACATTTTGACGTAGCAGCGCGGCCACAATTGCAAGATCATGATTTGACCTTTCCTCGCGTGTGTAGATGGGATAGTAGTAAATCTAACCAAAGGCAACGGGGTACTCCATGGTTTAAAGACCTGGATGATGATCAGGTCATCTGGAAACTCGAACCAACTTCTGAAGAGTTACAAATAGAGGTAATCAAAGAAGCACTGGGGTTGCTAGGTGACAACAAAGAACTTCAAAGTGTAGAAAGCAGTTTGACAAGCACACCCTCTAGCGTTCATGATGAAGATTCAAGGTTACAGCTTAGTATCAACAATGAAGTACATAGAGTGGACAATGATGGTTTGGAGAATCAGGTAGTGGAGGACACTCCCGAAAGGTCGAGCTTTTGTGATGAAGAATTCAGAGAGCAGGTCAATCCCAAAAACCTGATAGTGTTAGACACTACTCCGAATTTAACCATCTGTGGCAGAGAAAGGTCGAGCTTTTGTGATGAAGAATTCAGAGAGCAGGTCAATCCCAAAAACCTGATAGTGTTAGACACTACTCCGAATTTAACCATCTGTGGCAGAGAAAGGTCGAGCTTTTGTGATGAAGAATTCAGAGAGCAGGTCAATCCCAAAAACCTGATAGTGTTAGACACTCCTCCGAATTTAACCATCTGTGGCAGAGTAAGTAGGGTGCAAGAAATGAATCTTGAAAACCCGGTAGTCGTAGTTGAGGAAACCCCCACAGTTAATGGTATTGCTGACGAAGTAGGCGGAGATCAAGAGTTCACCAGCGAAAAACTCATGGAGGATACACTCCCAAAGTCGAGCTTTTCTGAAGACGATTTGAGAAAGGAAAACGGCATGTTAGAAGAGGAAAACTCTGAATTGAAAATGAAAATAGGCCAAGTAATGGAGGAAAATGAACTTCTCCGTAGGCAGGTTTTATCAAATACCCAATTCGAAGAGCAGAACGCTGAGTTGAAGAAAGAGCTGGACTTGTTGAGAGAAGAAATCAGAAATTTAAGACTGTCAACAGATAGTTATGCGGAGTTTGCGGACAGAGTGCATAGAAATATATTGGATCTAGGGCTGTGA 1758 0.4738 MRKSTRLSAIGLAQAPEPVKPFSTRFSLRAYAKRVQQLTPEQRSAISRTGFGNLLSVPNHTLNKVFLTELMDAWSCDRRAFALRSGGEIGMTPLDVALILGLPVAGNPVNLSEDEPLSDLEELYGATKAKRKVAMAFLENRLELIGDVASDDFVRSFLLYTIGTFLSSNDGKVDSRFLRFLEDLGEVSGFAWGGVVVDDLCYWLDKRKEHNVQYVGGCLIFLQTWSYEHFDVAARPQLQDHDLTFPRVCRWDSSKSNQRQRGTPWFKDLDDDQVIWKLEPTSEELQIEVIKEALGLLGDNKELQSVESSLTSTPSSVHDEDSRLQLSINNEVHRVDNDGLENQVVEDTPERSSFCDEEFREQVNPKNLIVLDTTPNLTICGRERSSFCDEEFREQVNPKNLIVLDTTPNLTICGRERSSFCDEEFREQVNPKNLIVLDTPPNLTICGRVSRVQEMNLENPVVVVEETPTVNGIADEVGGDQEFTSEKLMEDTLPKSSFSEDDLRKENGMLEEENSELKMKIGQVMEENELLRRQVLSNTQFEEQNAELKKELDLLREEIRNLRLSTDSYAEFADRVHRNILDLGL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02018 585 Pfam Plant mobile domain 50 277 IPR019557 -
Cca01g02018 585 PANTHER OS07G0283600 PROTEIN-RELATED 1 543 - -
Cca01g02018 585 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 LONG FORM HOMOLOG ISOFORM X1 1 543 - -
Cca01g02018 585 Coils Coil 500 565 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02018 - - gmx:102659735 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02018 01 47086683 47090667 Cca01g02018 01 47086683 47090667 ECH