Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01968 ATGGCAAGCCCCCATTAcctcctcacactctcactcctcctcctcctcTCATGCCACACCCTCCAGGCCCAACACGACACCTCCTTCGGTCGTTCCATGGACCGCAAGCTATTGGGCCTAGACAAGAAAGAAAAGCTGAGCCACTTCAAGTTCTACTGGCACGACATACAAAGCGGAAAGAGTCCCACATCGGTGTCGGTTGTTCCCCCACCCTTGAAGGTTAACACCACCACGGCCTTTGGCCTGGTCAACATGATCGACAACCCGTTGACCCTGGGACCCCAACTCAGTTCCAAGCTCGTGGGGAAGGCTCAGGGGTTCTACGCCTCGGCCTCGCTGAGCGAGGTGGGCCTTCTCATGGCTATGAACTTTGCTTTTGTTGAAGGGAAATACAATGGCAGCACCATCACCATCTTGGGGAGGAACTGTGTCTTCAACAAGGTTAGGGAGATGCCTGTCATTGGAGGGAGTGGACTCTTCAGGTTTGCTAGAGGCTATGCAGAGGCTAGGACTCATTCCTTTGATCTCAAAACTGGGGATGCCAATGTTGAATACAATGTCTATGTTTTGCATTATTGA 579 0.4922 MASPHYLLTLSLLLLLSCHTLQAQHDTSFGRSMDRKLLGLDKKEKLSHFKFYWHDIQSGKSPTSVSVVPPPLKVNTTTAFGLVNMIDNPLTLGPQLSSKLVGKAQGFYASASLSEVGLLMAMNFAFVEGKYNGSTITILGRNCVFNKVREMPVIGGSGLFRFARGYAEARTHSFDLKTGDANVEYNVYVLHY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01968 192 Gene3D - 35 187 IPR044859 -
Cca01g01968 192 Pfam Dirigent-like protein 47 189 IPR004265 -
Cca01g01968 192 PANTHER NUCLEOPORIN-RELATED 20 191 IPR004265 -
Cca01g01968 192 PANTHER DIRIGENT PROTEIN 20 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01968 Cca-Chr1 45946672 45947810 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01968 - - gmx:100775617 297.745