Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01886 ATGGATATAGCTATCTTCTCTCCATCATCCCTCTTCTCCGAAGATGAAATTGCTACTCGTGAGGAAAATGCAGACACTGAGGAGAGCTATGTCGAGAGGAAGCACCAGTTTCCTGGGATGGAGTTGATTATCCGAGAATTTTCCTTTCATCAACTAAATGCTAATTTACTCTGGCCAGGGACATTTGCATTTGCAGAATGGTTAGTTCAGCACAGGTCATGCATTGAAGGACGGCGTGCCATTGAGCTGGGGAGTGGCACAGGTGCTTTGGCCATATTTCTTCGGAAATCATATAATCTTGATATTACAACTTCAGACTATGATGATCAAGAAATAGAGAAGAACATAGCTCATAACTGCAGGGCAAATGAAATACCTGTCATTCCTCACATAAAACACACCTGGGGAGACAAATTTCCAAATTCTGAACCTGACTGGGACCTGATTATTGCAAGTGATATCTTATTGTATGTAAAACAGTATGCAAATTTGATACAGACCATTTCCTTTCTTCTCAAATGTTATAAGCCCCGAGATAGGAGAGAAACATCTCCAACTGACAATGATGAGAAAGACGGAGATGTAGTGTTGCCACGGCCAGCCTTTCTAATGAGCTGGAGACGCAGAATTGGGAAGGAAGATGAATTGCTTTTCTTCAATGGTTGTGAGAAAGCTGGTCTAAATGTGAAGCATTTTGGTTCACGTGTATATTGCATCAATCTCATAGAAAATGAGATATCAGAAACAAAAACTTGA 756 0.4074 MDIAIFSPSSLFSEDEIATREENADTEESYVERKHQFPGMELIIREFSFHQLNANLLWPGTFAFAEWLVQHRSCIEGRRAIELGSGTGALAIFLRKSYNLDITTSDYDDQEIEKNIAHNCRANEIPVIPHIKHTWGDKFPNSEPDWDLIIASDILLYVKQYANLIQTISFLLKCYKPRDRRETSPTDNDEKDGDVVLPRPAFLMSWRRRIGKEDELLFFNGCEKAGLNVKHFGSRVYCINLIENEISETKT 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01886 251 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 21 238 IPR019410 -
Cca01g01886 251 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 173 IPR029063 -
Cca01g01886 251 CDD AdoMet_MTases 79 173 - -
Cca01g01886 251 Pfam Lysine methyltransferase 41 173 IPR019410 -
Cca01g01886 251 Gene3D Vaccinia Virus protein VP39 28 240 IPR029063 -
Cca01g01886 251 PANTHER PROTEIN-LYSINE N-METHYLTRANSFERASE EEF2KMT 21 238 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01886 - - gmx:100803961 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01886 01 44148300 44153775 Cca01g01886 01 44148300 44153775 ECH