Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01867 ATGTCCGGATCTGGAACCAGTGAATCCGATTCCAAATTGGGTGGATGGGTTTCTTCTATGAAATTGTTGTTGGGGTTTCTGCGAGATGAAGCTCTCGGTGTGAAAGCATGTAGCATTTCAGGAGTTCCGGAACAGTTTCGAAAATCGGAAAAGGAATCTGAACCTTACAAGCCAAAGGTGGTATCCATAGGACCCCTCTACAAGGGAAACAAAAGGGACCTGCTACACATGGAAGAGATCAAATACCGTTTCATGCACTCTTTATTTCATCGAACCACAGACCCACTTGGATCCTTCGACGAATGCAGCAAAATCATTCTTCATTTAGACATGTTAGTCCGAACATTCTACGTGGACGACATCGAATTCAACAACTACGACCTCGCCAAAATCATGTTACTCGATGGCTGTTTTCTGCTTGAGCTTCTCATCACCAAAGCCGAGGAATCAGATAATGATTTTAGAGCTTTACAAAGCCTCTCAGGCGTACCTCTTCAAATAAAGAGCCACGAGTTCAAACACTCCTTAGCCGATGTAAGAAAAATGAGTGAGGTCCTTTTGGATTTGAAATTACTCGGAAACCAGATACCTCTCTTCGTTCTCATTTTGCTCTTCCATATACTTTTTGTCCCAGCTGAGATTGACAGTGATGGGTTAAAACATGTTCGAAAAATCATCAACGCCCTTGCCCTGTTTCTCTTTGGCTGTACTCATTCCGTTAATGTGACAGATTGCCCTAATGCAGCACACTTACTCGACACCGTGCACAGTTTCGAAACAAAGAATGAAGATGGAAATAGAATTGCTCCGGAAAGCAAGCATCATTTGAAGTTGAAATGCTGTGCATATAGGTTCTTATCCGACGGGATTAAAATTACGCGGGCTGAAGATCATAGCTTTGATTTTGAGAATGAGGGCGCTATATTTGGTTGTTACAAACTTCTCAAAAAGGGAACCTTGGAGATACAGCGTCTGAACATCACTGAAGAAAAGGAAATTGAATGGCGGAATTTCGTTGCATGGGAGCAGAACAGAATTACGCATGAAAAATACGTCGGTGGAAAACATGACCGGACTAGCTGCAGATTCAGCGAGATTGCTGTGTCGCTCAGAGGTTTGGTTTGCTGTGAGCACGATATCAAACTGCTTTACAAAAGTGATGTTTTAGAAACCCAGTGGAGCAATGAGGACTTGATGAATTTCTTTCGTTCACTCGCCCGTGGAATTCAGATTGATACTAATATGGTCGACAAGTACGATGAGATGATTCAGACCTTAAAGGAAAATCCGGATCACAGAATAAACTTTAAATTATTTTGGCTTTGGCATAAACTCAAACGAGTAATGATAAACGCAAAGTACGAGCTCAGGGAAATGTTTGCTACTTTGAAACGCGACCACACTCCCACAGTGTGGAAAACTATCGGAGTAATCGCCGCGGTCGTGCTTCTTTTTCTCACCGTTGCCCAGACTGTTTTTGCAGCCATTGGCTTGTAG 1497 0.4275 MSGSGTSESDSKLGGWVSSMKLLLGFLRDEALGVKACSISGVPEQFRKSEKESEPYKPKVVSIGPLYKGNKRDLLHMEEIKYRFMHSLFHRTTDPLGSFDECSKIILHLDMLVRTFYVDDIEFNNYDLAKIMLLDGCFLLELLITKAEESDNDFRALQSLSGVPLQIKSHEFKHSLADVRKMSEVLLDLKLLGNQIPLFVLILLFHILFVPAEIDSDGLKHVRKIINALALFLFGCTHSVNVTDCPNAAHLLDTVHSFETKNEDGNRIAPESKHHLKLKCCAYRFLSDGIKITRAEDHSFDFENEGAIFGCYKLLKKGTLEIQRLNITEEKEIEWRNFVAWEQNRITHEKYVGGKHDRTSCRFSEIAVSLRGLVCCEHDIKLLYKSDVLETQWSNEDLMNFFRSLARGIQIDTNMVDKYDEMIQTLKENPDHRINFKLFWLWHKLKRVMINAKYELREMFATLKRDHTPTVWKTIGVIAAVVLLFLTVAQTVFAAIGL 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01867 498 PANTHER DUF247 DOMAIN PROTEIN 13 496 - -
Cca01g01867 498 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 13 496 IPR004158 -
Cca01g01867 498 Pfam Plant protein of unknown function 39 486 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01867 Cca-Chr1 43642463 43644407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01867 - - ccaj:109810133 986.867