Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01864 ATGGATTATCAAAAACTTATCAATGTTGACAACACCAGTTGGATGATTCCAATTGAAATGATGTTGGGTAGTATAATTCACAGAGAAGTTCAGTCATGCAGCATCTCCAAGGTTCCAGACAGAATTCGCAAGCCAAACAATGGAGCATACAAGCCCCAGGTTGTCTCCATTGGACCCTACCACAGGGGATCCGAAGGCGAAAACGATCTCATGTTGATGGAACAACCTAAGTGGAGTTACATGTTGCATATTCTTGGACGTTCCCAAGAACAAGAAAATGGAAAAACCGAGGAAAGTCAACAGGGACCAGAACAAGAAAATGGAAACGCCGAGGAAAGTCAACAGGGACCAGAACAGGAAAACGAAAACGCCGAGGAAAGTGATCAGGGACCAATTACGTTGAAAATTTGCGGCACAACCATTCTGGAGTTAGACAGCATAATCCGTGCCAGCTACGGAGGGAACATCCAAACCGAACCACACGAGCTGGCCAAAATAATGCTACTGGATGGTCTTTTCTTGTTGGAATTTCTAATCAGGCTTAGCAAGTACATGGATGCCTTGAGCGACAACAATTATTTTGTCCATAGTCATTACCATGATGACCCCATATTCGAAAGCCAGGAGAAACTATTGTCTGTTTTGAGTGACATGTTGTTGCTTGAGAATCAAATACCCTTCATTGTTCTCAAGAAGTTGTATAGGAGACTCTTCCCCTGTGATGTTCCCAGTGAGGAAGATCATCGTGTTGCTGAACTTGCATTGGGAGCTCTTGGCTACCCTTTGATTACTCCTACAGCTGGCGTGGCTCACCTCCTTCACCTTGTTCATTTGTCCATAACAAACCAAGAGGAGAGACACGAAACGAGGCACGCGCGGCGAGAGTTGAAGTGTTGTGCTACGAGGCTTCGAGCTAATGGAATAAAAATAAAACCCGCGGAAAGAAGCAATGTTGATTATGCTGATTATTTGAACAAGTTTGAGTTTTTTGATAACTTTGACTTTGAGATAAAATTCAACAACGACGATGGGGTGTTGGAGATTCCTCAGCTGCATATTAAGAAGTCAACGGAAGTCAAATGGAGGAACTTGATCGCCTGGGAGCAAAGCAGGATTGGGAACAGATGCAAATTGACTTCGTATGCATTGTTCTTCCAAGGTTTGATTTGTTGTCCCCATGACATTGAACTGCTTGAGCATGTCGGGGTTTTAGTCAATGAATCCGAGAAAAGTAATGAAGATTTGCTGAAGCTGTTTCATACGATCTGTGAGGGAGTTGAACACATGGATTCGAGTTATAGCGAAGATTGTGCCAAGTTGAACAAATACACGACAACGACTCTATTAACTATGTTGAAAAAATGGCCTATTGTAATTTGGCATCAGTGCAGATGTCTCTTTGCGATTATTCTTTTCTATTGGAAAAATTGGTACAGCATTTTGATCAAGGAACATATCCCTACGGTTTGGAAACTCATTGGAGTGTTGGCAGCTATCGTGCTGCTAGGTCTCACTGTGGTACAGACATATTATGCAGCACGCAGCGATAATTAA 1554 0.4279 MDYQKLINVDNTSWMIPIEMMLGSIIHREVQSCSISKVPDRIRKPNNGAYKPQVVSIGPYHRGSEGENDLMLMEQPKWSYMLHILGRSQEQENGKTEESQQGPEQENGNAEESQQGPEQENENAEESDQGPITLKICGTTILELDSIIRASYGGNIQTEPHELAKIMLLDGLFLLEFLIRLSKYMDALSDNNYFVHSHYHDDPIFESQEKLLSVLSDMLLLENQIPFIVLKKLYRRLFPCDVPSEEDHRVAELALGALGYPLITPTAGVAHLLHLVHLSITNQEERHETRHARRELKCCATRLRANGIKIKPAERSNVDYADYLNKFEFFDNFDFEIKFNNDDGVLEIPQLHIKKSTEVKWRNLIAWEQSRIGNRCKLTSYALFFQGLICCPHDIELLEHVGVLVNESEKSNEDLLKLFHTICEGVEHMDSSYSEDCAKLNKYTTTTLLTMLKKWPIVIWHQCRCLFAIILFYWKNWYSILIKEHIPTVWKLIGVLAAIVLLGLTVVQTYYAARSDN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01864 517 Pfam Plant protein of unknown function 35 502 IPR004158 -
Cca01g01864 517 PANTHER DUF247 DOMAIN PROTEIN 13 100 - -
Cca01g01864 517 PANTHER DUF247 DOMAIN PROTEIN 135 515 - -
Cca01g01864 517 MobiDBLite consensus disorder prediction 100 117 - -
Cca01g01864 517 MobiDBLite consensus disorder prediction 89 130 - -
Cca01g01864 517 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 135 515 IPR004158 -
Cca01g01864 517 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 13 100 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01864 Cca-Chr1 43609580 43611183 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01864 - - ccaj:109810124 1017.3