Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01859 ATGGAAAAGAAGCCAGGGTGGAAGGCCATTTCCTACATCTTAGGAAATCAAGTAGTTGAGAGGATTGCAACACTGGGCATGATGGCGAATTTCATGGTGTATTTGTTGCAAGTCTTCAACTTGGGTCAGGTTGCTGCTTCAAATATTCTTGGCATATGGATTGGAGTGAGCAATTTCACACCAATTCTTGGTGCCTGTGTTGCTGATGCCTATCTAGGAAAATTCAGCACCATTGCTATTTCATCATTTGGAACACTCGTGGGAATGGTGATACTAACACTAACAGCTTGGTTGCCACAACTTCATCCTCCAACTTGCACTTCTCCCGAAAAATGTGTTCCTTCAACCAGCATTCAACTTGGCATCTTAATTTTAGGCTTGTGCTGGCTAGCTGTGGGCACAGGTGGAATTGGACCATGCATTATTCCCTTTTCGATTGATCAGTTTGACACAACTACTACTAAAGGGAGGAAAGGAGTGAACAGGTTCTTTAATTGGTACTACACTTCTCAGACAGTGGTCCAGTTGATTAGTCTTACAGCAATAGTATATCTCCAAAACAAAAGCTGGATCTTGGGTTTTGGCATACTAAGTGTCCTCGTGTTACTTTCAATTATCATATTTTTTGTTGGAGCAAACGTTTATGTTTACATTCCAGCGGAGGGGAGCATTTTTTCTGGTATTGTACAGGTGTTTGTTGCCGCTTATAAGAAGCATCGCCTCCAAATTCCGGTAAAAGAAGAGGAAGGTGTTTACTATGATCCCCCAATGGATGACCAAGAAACACTGAGGCTGCCCTTAACCAAAGAACTTAGGTGTTTAAACAAAGCAGCCCTGATACAAGGCAACGAAGTGAACTCAGAAGGCTGCGCGGAAAACCCGTGGAGGCTGTGCAGCATTCAGCAAGTGGAAGAAGTAAAATGCTTGATCAAAATGCTTCCGATATGGGCCTCGGGCATCCTCTGCTTCATCCCCATAGCCCAACAAGGCAGCTTCCCGGTCTCCCAGGCCCTGAAAATGGACCGCCACATCGGGCCCAACTTCGAGCTCCCCGCCGCATCGTTCAGCGCGGTGTCCCTAATCACCATCGCCATATTCCTCCCATGCTTCGACCTCTTCCTGCAGCCACTTCTCGCCAGACTCACGCGACAAGAAGAAGGCCTCACCAGCCTCCAGAAGATACTCATCGGCGACATATGCTCCATTCTCACAATGCTCACCGCGGGCCTCGTCGAGTGGCGCAGAAGGGTCGTCGCCGCCGCCGCCACGTCACGTGCACCCATGTCCGCCACGTGGCTGGCGCCGCAGTTCGTCTTCTTGGGGCTGTGTGAGATGTTCACCCTCGTGGGGCACATTCAGTTTTACAGCTCGGAGTCGCCGGAGAAGATGAGAAGCGTGGGGAACTCGTTGCAGTATCTCGTGATCGCGTTCTCCATCTACGTTGGGACGTTGGTGGTGAACGTGGTGCACCAAGTGACTCGGAAGCGTGGTGGGGTTGATTGGCTCCACGATGACATCGATGCTGGGAGGTTGGACTACTATTACTTCCTTGTTGCGGGGTTAGCGGCGCTCAATCTTGTCTACATCGTCTTCTGCGTTAGACGCTACCGTTATAAGATCAAGGTCAAGGTAGAAGATCGTCATGTCGACACACACCTTGACCCTTGA 1668 0.4934 MEKKPGWKAISYILGNQVVERIATLGMMANFMVYLLQVFNLGQVAASNILGIWIGVSNFTPILGACVADAYLGKFSTIAISSFGTLVGMVILTLTAWLPQLHPPTCTSPEKCVPSTSIQLGILILGLCWLAVGTGGIGPCIIPFSIDQFDTTTTKGRKGVNRFFNWYYTSQTVVQLISLTAIVYLQNKSWILGFGILSVLVLLSIIIFFVGANVYVYIPAEGSIFSGIVQVFVAAYKKHRLQIPVKEEEGVYYDPPMDDQETLRLPLTKELRCLNKAALIQGNEVNSEGCAENPWRLCSIQQVEEVKCLIKMLPIWASGILCFIPIAQQGSFPVSQALKMDRHIGPNFELPAASFSAVSLITIAIFLPCFDLFLQPLLARLTRQEEGLTSLQKILIGDICSILTMLTAGLVEWRRRVVAAAATSRAPMSATWLAPQFVFLGLCEMFTLVGHIQFYSSESPEKMRSVGNSLQYLVIAFSIYVGTLVVNVVHQVTRKRGGVDWLHDDIDAGRLDYYYFLVAGLAALNLVYIVFCVRRYRYKIKVKVEDRHVDTHLDP 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01859 555 CDD MFS_NPF1_2 10 536 - -
Cca01g01859 555 Pfam POT family 75 501 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca01g01859 555 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 3 546 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca01g01859 555 Gene3D MFS general substrate transporter like domains 1 545 IPR036259 -
Cca01g01859 555 PANTHER PEPTIDE/NITRATE TRANSPORTER 3 546 - -
Cca01g01859 555 SUPERFAMILY MFS general substrate transporter 7 543 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01859 Cca-Chr1 43456746 43461586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01859 1 554 Organic Solute Cotransporters AT1G69870 48.577 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01859 - - ccaj:109792442 1082.01