Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01844 ATGGCACAGCAAGAACACAGTTCAGAAGTAAGCACCAAACCTCCTCCTAAGTCATTCTTGCACTCCACAAAAGCTTCACTCCGTAATCTATTCCTCTTCTCAAAGACCATACCTTTTATTGGCGGTTTGGTTGTAAGCTACAATTTTTTGGAAATAGCGGTGCTGTCTACATTGATGGACTACCTCACAGATTTTATGGATGGTGACCAGCGGATAGCTGCTGTTGTTGTTAATCTGCAAGATGCTCTATCGTCTTTCTTTTTTCTTTTTGTTTCTCTAATCGAAGAAGCATACGTGGATTGTTTCACTCTGATCACATTATGCACTGCAGCTTCCATTGAGGGCTTAATGTTACTATGGACGTCTACAACAACTTTAGAGAATTTTGCATGCTATACAGCGATATTCCTCCTTACATTGGGGAAAAGCGGGCAAAAGCTTTCAGAAAATTTCCTCGAATATCAGGTaaaagagaaaattgaggagaaaaaagaaagagaaGTAGAACATGGAAGCAGGCAAAACAACAGAGCGCAAGACCACGTTGGTAGAAGTCATACAAATAATATATGGCTGCTATTCTTTGTTTCAATTGTTGGATATGTCATAACAGTTTGTATGGCCTTTACCATGAATGATGCAAGCTACGATTACACCTTCAGAGTTGCGGCACTTCTTATGGGGGGGACTCATCTGTTTTTCCTCTTTGGTTGTGTGGGGTATAGGCGCAAAGAATTGAGAACTGAAAGCTATCTACACATGATCTATAGAATCTGCAAAGCAGCTTTACGGAAGCGAAAATCAAAGTATCCAGCCACAGCGAATTCTTATCACTGGAAGAATTATAAACAGAAGCACTTGTATAAGCATGGAAGAGGACTAAGGTTATCCCCGAAAGTTCCACGGTTATTCAGGTGGTTGGACAAAGCAGCTATAGTTGAAGTTGAAGGAGAAGAGTGTAGTGATCATGAAATGCAAGAAAAGAAAGGGAAGCTTTGCATGGTAAAGGAAGTGAGGGAAGTGAAGAGCCTTGTTCCTATGATCTACCTGTACGTAGCCATTGTTGGTTACAGTTTACTCCTGGCCACCAAGAACACGTTCTTTGTTGCACAAGTAAACATCGTGACCCCTATTACAAAGAGTAATAGGGATATCTGGATTCTCTTTTTGATCTCGGACTTCATGATTTATGTATCGGAAGGGATCTGCTTTATTACTAGATTTGCATTTGGACGCTTGAAAAAATTCAAAAGTATGGATGGTAGGGCCAAAAGAAAAGCAGGCACACTTATAAGGATTGGTTTTGGCATGCTTTGTGGGGTTACTTGCTGCCTCGTAGCATGCCTAATGGAGACTCGTAGATTGTCGATTACTGATAATGAGACAGGGGACCTGAAACGAGGAGGAAGGAACTCGACAACGGCCTTAGTGCCACAATTTGCATTGGTAGGAACCACGGAGGGATTTGTTGAGGGGGGCTTAAGCAGTTTATTCGAGTGCCTCGTAGCAAATTCAATGTGGTCTTTCGAGGAATCGTTTACTGAAATAGTGATCGGTACTGGCAAACTCCTAAATATACCACTTGTCTTATTTTCCAGAAGCTGGATCCAGAAAACTATCGACACTAGCCATTTGAACAGATACTATCTGTTGTTGGGAATACTGAACGCTGCGTTCCTTGTCGTTTTCGGATACTACTCCATCAGATATGCATACAAGGAAGCATGGCCGGAAGATGAATTGAAACATCCTCCTCATCAACCACATTCACATCATGAAAATAATGATAATGAAGCACAACTGGTGGACCAAGAACCATATGAAGAAAACAACGAGAATGTAGACGTTTCATGGGTTGATTTTCTAACTCTTGATTCCTGA 1881 0.4078 MAQQEHSSEVSTKPPPKSFLHSTKASLRNLFLFSKTIPFIGGLVVSYNFLEIAVLSTLMDYLTDFMDGDQRIAAVVVNLQDALSSFFFLFVSLIEEAYVDCFTLITLCTAASIEGLMLLWTSTTTLENFACYTAIFLLTLGKSGQKLSENFLEYQVKEKIEEKKEREVEHGSRQNNRAQDHVGRSHTNNIWLLFFVSIVGYVITVCMAFTMNDASYDYTFRVAALLMGGTHLFFLFGCVGYRRKELRTESYLHMIYRICKAALRKRKSKYPATANSYHWKNYKQKHLYKHGRGLRLSPKVPRLFRWLDKAAIVEVEGEECSDHEMQEKKGKLCMVKEVREVKSLVPMIYLYVAIVGYSLLLATKNTFFVAQVNIVTPITKSNRDIWILFLISDFMIYVSEGICFITRFAFGRLKKFKSMDGRAKRKAGTLIRIGFGMLCGVTCCLVACLMETRRLSITDNETGDLKRGGRNSTTALVPQFALVGTTEGFVEGGLSSLFECLVANSMWSFEESFTEIVIGTGKLLNIPLVLFSRSWIQKTIDTSHLNRYYLLLGILNAAFLVVFGYYSIRYAYKEAWPEDELKHPPHQPHSHHENNDNEAQLVDQEPYEENNENVDVSWVDFLTLDS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01844 626 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 51 565 - -
Cca01g01844 626 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 51 565 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca01g01844 626 Gene3D MFS general substrate transporter like domains 16 577 IPR036259 -
Cca01g01844 626 Pfam POT family 166 526 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01844 Cca-Chr1 43065999 43083599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01844 39 578 Organic Solute Cotransporters AT3G53960 23.104 1.12e-26 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01844 - K14638 ccaj:109818666 1247.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01844 01 43065999 43083599 Cca01g01844 01 43065999 43083599 ECH