Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01807 ATGTCTAAAGATAGTGATGTGGAAAACCCTACTAATAACCCCACTGTTCAAAAGGGTGTGGATGTGAATGGCAATTTGAATGTGAGTCATGTTGAGGGAAATTGGTACACTTCATTGGTGCATCAAATTTCTGTATATGGTGTGGCTGCTGGGTATTGTTTATCTGCATCATTGCTTTCCATTATCAACAAATGGGCAGTGATGAAATTCCCTTACCCTGGTGCCCTAACCGCCTTGCAGTACTTCACCAGCGCCGCCGGGGTCTTCCTCTGCGGCCGGCTGAAGCTCCTGGAGCATGACTCCCTTGACCTTATGACCCTGTGGCGGTTTTTGCCGGCTGCTATAATATTTTACCTGTCCCTTTTCACCAACAGTGAGCTGCTCCTACATGCCAATGTTGACACCTTCATTGTGTTCCGCTCGGTCGTTCCCTTGTTTGTCGCGGTAGGGGAGACACTGTTCTTGCACCAGCCATGGCCGTCGGCGAAGACGTGGGCCTCCCTGGCCACCATCGTTGCCGGCAGTGTGCTCTATGTGGTCACTGATTATCAGTTTACTTTCATGGCTTACAGCTGGGCGCTGGCCTACTTGGTTAGCATGACCATAGATTTTGTTTACATAAAACATGTGGTTATGACCATTGGCTTGAACACATGGGGTCTTGTGCTGTACAATAATCTTGAGGCTCTTTTGCTCTTTCCCCTGGAGCTGCTGATTATGGGGGAGCTGAAGAAGATTAAGCATGATATCGATGATGAGACTGATTGGCACTCGTTCCAGGTCATTTTGCCGGTGGGATTGTCGTGTCTGTTTGGTCTATCGATCTCGTTCTTTGGATTTTCTTGCCGCAGGGCGATTTCTGCAACCGGATTTACTGTCCTTGGTATAGTGAACAAGTTGTTGACAGTTGTGATCAATTTGGTGATATGGGACAAGCATTCAACATGGGTGGGTACGGTGGGACTTCTGATTTGTATGCTGGGTGGGATTATGTATCAGCAATCAACAAGCAAGCCCAAGGCTGCAAAACAGGCAAGTGCACAAGAAAAGGAGGAGGAACAACAGAAGTTGCTTGAAATGCAAGGCACTTCAGTGGCCAACATCAATAATAATGATGTTAATAAACCAAGGGAGGAAAGATGA 1143 0.4724 MSKDSDVENPTNNPTVQKGVDVNGNLNVSHVEGNWYTSLVHQISVYGVAAGYCLSASLLSIINKWAVMKFPYPGALTALQYFTSAAGVFLCGRLKLLEHDSLDLMTLWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSVVPLFVAVGETLFLHQPWPSAKTWASLATIVAGSVLYVVTDYQFTFMAYSWALAYLVSMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELLIMGELKKIKHDIDDETDWHSFQVILPVGLSCLFGLSISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVIWDKHSTWVGTVGLLICMLGGIMYQQSTSKPKAAKQASAQEKEEEQQKLLEMQGTSVANINNNDVNKPREER 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01807 380 Pfam Triose-phosphate Transporter family 56 332 IPR004853 -
Cca01g01807 380 MobiDBLite consensus disorder prediction 358 372 - -
Cca01g01807 380 PANTHER GDP-MANNOSE TRANSPORTER GONST3 25 365 IPR029665 GO:0005794|GO:0015780
Cca01g01807 380 PANTHER SOLUTE CARRIER FAMILY 35 25 365 - -
Cca01g01807 380 MobiDBLite consensus disorder prediction 1 21 - -
Cca01g01807 380 MobiDBLite consensus disorder prediction 341 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01807 Cca-Chr1 42230771 42232409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01807 34 380 Lipid Metabolism Gene Families AT1G76340 80.172 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01807 - - gmx:100806634 629.017