Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01709 ATGGCTAAGGCAATCAAATTCTTTGAGCTGAACACAGGGGCTAAGATTCCTTCTCTTGGGTTAGGAACTTGGCAAGCTGAACCTGGTGTTGTAGCTAAAGCTGTAACCACAGCCATTCAGGTTGGATACAGGCATATTGATTGTGCTAAAGCGTATAACAATCAAGCAGAGATTGGATCTGCACTTAAGAAGGTTTTTGATGAGGGTGTGGTGAAGCGTGAGGACCTATGGATCACTTCCAAACTCTGGTGTTCAGATCATGCTCCAGAAGCTGTGCCAAAAGCGTTGGATAAAACATTACAAGATCTGCAACTTGACTACCTTGACCTCTATCTGATCCACTGGCCAGTCAGCATGAAAAGGGGATCAGCCGGATTCAAGAAAGAAAATTTGGATAAACCAGACATTCCCAGCACATGGAGAGCAATGGAGGCACTCTATGATTCAGGCAAGGCTAGAGCCATAGGAGTGAGCAATTTCTCTACAAAGAAGCTTCAAGATTTGTTGGATATAGCAAGAGTGCCTCCTGCTGTTAACCAAGTGGAATTGCACCCTGGATGGCAGCAGCCAAAGTTGCATGCATTATGTGAATCCAAAGGAATTCATCTATCTGGATATTCTCCACTAGGCTCACCAGGAGTTCTGAAAAGTGACATTCTTAAGAATCCTGTTGTCACAGAGGTTGCAGAGAAATTGGGGAAGACACCAGCACAAGTAGCCCTTAGATGGGGCTTGCAAACAGGTCACAGTGTGCTTCCTAAGAGCACTACTGAGTCCAGAATCAAGGAAAACTTTGATGTCTTTGACTGGTCTATTCCTGAAGACCTGATGCCAAAGTTTTCTGAAATTAAGCAGGATAGGTTAATTAAGGGCGATTTTTTTGTTGACGAGACCTATGGTGCTTATAAGACAATTGAAGAACTCTGGGATGGTGAACTCTGA 942 0.4395 MAKAIKFFELNTGAKIPSLGLGTWQAEPGVVAKAVTTAIQVGYRHIDCAKAYNNQAEIGSALKKVFDEGVVKREDLWITSKLWCSDHAPEAVPKALDKTLQDLQLDYLDLYLIHWPVSMKRGSAGFKKENLDKPDIPSTWRAMEALYDSGKARAIGVSNFSTKKLQDLLDIARVPPAVNQVELHPGWQQPKLHALCESKGIHLSGYSPLGSPGVLKSDILKNPVVTEVAEKLGKTPAQVALRWGLQTGHSVLPKSTTESRIKENFDVFDWSIPEDLMPKFSEIKQDRLIKGDFFVDETYGAYKTIEELWDGEL 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01709 313 ProSitePatterns Aldo/keto reductase family putative active site signature. 252 267 IPR018170 GO:0016491
Cca01g01709 313 ProSitePatterns Aldo/keto reductase family signature 2. 143 160 IPR018170 GO:0016491
Cca01g01709 313 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 2 312 - -
Cca01g01709 313 PIRSF AKR 1 306 IPR020471 GO:0016491
Cca01g01709 313 CDD AKR_AKR4C1-15 6 290 IPR044498 GO:0016491
Cca01g01709 313 ProSitePatterns Aldo/keto reductase family signature 1. 42 59 IPR018170 GO:0016491
Cca01g01709 313 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491
Cca01g01709 313 PRINTS Aldo-keto reductase signature 98 116 IPR020471 GO:0016491
Cca01g01709 313 PRINTS Aldo-keto reductase signature 143 160 IPR020471 GO:0016491
Cca01g01709 313 PRINTS Aldo-keto reductase signature 177 206 IPR020471 GO:0016491
Cca01g01709 313 PRINTS Aldo-keto reductase signature 219 243 IPR020471 GO:0016491
Cca01g01709 313 Gene3D - 4 313 IPR036812 -
Cca01g01709 313 SUPERFAMILY NAD(P)-linked oxidoreductase 5 286 IPR036812 -
Cca01g01709 313 PANTHER ALDO/KETO REDUCTASE 2 312 - -
Cca01g01709 313 Pfam Aldo/keto reductase family 19 283 IPR023210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01709 Cca-Chr1 39778248 39781034 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01709 K00002 - gmx:100801791 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01709 01 39778248 39781034 Cca01g01709 01 39778248 39781034 ECH