Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01704 ATGGTCGTTGCCACCATGGCCCCATGGCGTCACAAGGCGGTGCCGGAGGCAAATACCCTTGGCATCCTCGCCTTCGACGCCGGAAAAACCATGTGCAGCCTCATCTCCCTCTACCACTCCCTCTCCGACGAAGAAATCACCAAGCTTCGCACCGAGGTGATCAAAACAAAAGGTGTCACATACTTGAATTCCCAACATGAGTGCTTCCTCCTCAACCTCGCCGCCGCCGAGCGCCTCGAGGAGCTCGACACGGCTGCCGACACCGTCTCGCGACTCGGCCGGAAATGTTCCGACCCCAGCCTGAGCCAGTTCGACCTTGTCTATGCAGATCACAAGGTCGGTCTCATCGACCTCCGGAAGTTAGGTTACAGTACCCGTAACACTCCTAAGATCATTTCCAAAATGGAAAAATTTGTCTCTTCGACTAGAAGTCTGCATTCTGCCATGGAAAACATGGCAGAGTTAGAGACTTCTGAGAAGAAGAGACAACATTGGAAAGCTAATAACTATAACTATGGAAAACACAACTTTGAACATTTGAATGAGCAGATAGGATATCATAGAAAGCAAGTGGAGCATTACAAGGAAGTGTCACTATGGAACCAATCATTGGACAAAACAGTTGGGATCATGGCTAAGGTTATTTGCATTGTCTACGCTAGATTATGTTGTGTGTTCGGAGCCTACATTTCTAATTGCAACTGCTATAACGACAGCAATTGTTGTTGCCTCTTGGAACACCGCGAGTTGTACAAGAAAAATAACTGTCTCTACGAGGAATCACTTTACAAGCGTGTAACAAGATCGGGTCCTATTCCCAAGGGTAGTAACAACAAAACCGGTGTGATCCGGTTCTTGAACCATGACGTTGGGGAATTCGATAAGCCAATGAGTAGTGGTAACAATAGGGTTTTGAGGCTGGCGCCGCCGTCCACGGTGGGCGGGGCGGGGCTTGCGGCGAGGTACGCGGAGGTGGTTTTGTTTGCGGAGCGGTGTCTGCGGGCGCCGGCGACGGTGGGGGAGGAGGCGCGGGAGGCGATGTATGAGATGCTGCCGGAGGGGGTGAGGCGGAAGGTGGGGGCGAAGCTGCGGGGGCGGTGGCGGAGGGAGGAGGAGGAGGGGGAGGCGCTGGCTGAGGGGTGGCGGGACGCGGTGGAGGAGCTTTTGGAGTGGCTGTTGCCGGTGGCCCACGACACCGTGCAGTGGCGGGCGGAGAGGCTGATGGAGAAGGCGAGGTTTGAGACGAGGACGACGGCGCTGCTGCTGCAGACGCTGCATTACTCCGACTTGGAGAAGACAGAGGCTGCCATTGTGGAGGTGTTGGTGGGTTTGAGTTGCATATACAGGTGTGAGAGAAGGTGA 1362 0.5419 MVVATMAPWRHKAVPEANTLGILAFDAGKTMCSLISLYHSLSDEEITKLRTEVIKTKGVTYLNSQHECFLLNLAAAERLEELDTAADTVSRLGRKCSDPSLSQFDLVYADHKVGLIDLRKLGYSTRNTPKIISKMEKFVSSTRSLHSAMENMAELETSEKKRQHWKANNYNYGKHNFEHLNEQIGYHRKQVEHYKEVSLWNQSLDKTVGIMAKVICIVYARLCCVFGAYISNCNCYNDSNCCCLLEHRELYKKNNCLYEESLYKRVTRSGPIPKGSNNKTGVIRFLNHDVGEFDKPMSSGNNRVLRLAPPSTVGGAGLAARYAEVVLFAERCLRAPATVGEEAREAMYEMLPEGVRRKVGAKLRGRWRREEEEGEALAEGWRDAVEELLEWLLPVAHDTVQWRAERLMEKARFETRTTALLLQTLHYSDLEKTEAAIVEVLVGLSCIYRCERR 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01704 453 PANTHER OS10G0380300 PROTEIN 12 453 - -
Cca01g01704 453 Pfam Protein of unknown function (DUF668) 312 400 IPR007700 GO:0045927
Cca01g01704 453 Pfam Domain of unknown function (DUF3475) 22 77 IPR021864 GO:0045927
Cca01g01704 453 PANTHER BNAC09G50660D PROTEIN 12 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01704 Cca-Chr1 39500691 39502722 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01704 - - gmx:100796635 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01704 01 39500691 39502722 Cca01g01704 01 39500691 39502722 ECH