Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01697 ATGAACAGAACTTCATATCAGTGCCTTCCTTCGTTCATATCAGTTTCTCAGAACAAACACAAAAGCAAAAAAAAAATGGAACTTCTGCAAAATGGTCATAAACCTTTCGTTGTCATGAAACCTTCCGAGTTGCCCCTAACCAATAATGGGTTTTCTATACTCAACTCGCTCTCCGAAACTCAGTACCTGGGCAACATAGATCCTTCCAGAGTTTTCGTCACCAAGGTCAAGCGTCTCATTGTGAAGGTTGGCACAGCAGTTGTTACTCGAAGTGATGGAAGATTAGCTTTGGGCAGAATTGGAGCTCTCTGTGAACAGCTTAAAGAACTTAGTACTCAAGGGTATGAAGTCATTTTGGTAACTTCAGGTGCTGTTGGTCTTGGCAAGCAAAGACTTAGATATCGCAAATTGGCCAATAGCAGTTTTTCTGATCTTCAAAAGCCGCAAGGTGAGCTTGATGGAAAAGCATGTGCAGCTGTTGGGCAGAGTAGTCTTATGGCTCTTTATGATACCATGTTTAGCCAGCTTGATGTGACTTCTTCCCAACTTCTTGTGAATGATGGGTTTTTTAGGGATGCTGGCTTCAGAAAACAACTTTCGGACACGGTGAATTCATTGTTAGATTTAAGGGTTATCCCCATTTTCAATGAAAACGATGCTGTTAGTACAAGGAAGGCACCATATGAGGATTCCTCTGGTATTTTCTGGGACAATGATAGTTTGGCTGGTCTATTAGCCCTTGAACTTAAAGCTGATCTTCTTGTTTTATTGAGTGATGTTGAGGGCCTTTATAGTGGTCCTCCAAGTGACCCAAATTCAAAGTTGATCCATACATATATAAAAGAGAAACATCAAGAGGAAATTACTTTTGGAGATAAATCAAGATTGGGCAGAGGGGGTATGACTGCCAAAGTTAATGCTGCTGTTTGTGCTGCTCATGTTGGCATCCCAGTAATTATAACTAGTGGTTATGCTACAAACAACATCTTACGAGTGCTTCAAGGGGAAAGAATAGGCACTGTCTTTCATAAAGATGCTCATCTATGGATCAATATGAAGGAAGTGAGTGCACGTGAAATGGCAGTTGCAGCTCGTGAGGGTTCTAGACGACTTCAGCTCCTCAAATCTGAAGAAAGGAGCAAAATATTGCTAGCAATTGCTGATGCATTAGAGAAAAATGAAAGTACGATAAGGTTTGAGAATGAGGTTGATGTTGCTGATGCAGTGGCTTCTGGATATGAAAAATCCTTGATATCACGTTTAACATTGAAGCGTGAGAAGATCTATAGTCTTGCAAAGTCTGTGCGTAAGTTGGCAGATATGGAAGAACCAATTGGCCAAATTTTGAAAAGAACTGAGCTAGCAGATAAACTCATCCTGGAGAAAATATCATGTCCTTTGGGTGTTCTTTTGATTATATTTGAGTCTCGACCTGATGCCCTTGTTCAGATAGCTGCATTGGCAATTCGAAGTGGGAATGGTTTACTACTTAAAGGTGGAAAGGAAGCTCGACGATCAAATGCAATCTTACACAAGGTCATTACTTCAGTGATGCCAGATACCGTTGGTGACAAACTTATTGGACTTGTGACTTCAAGAGATGAAATACCAGACCTACTTAAGCTTGATGATGTGATAGATCTAGTGGTCCCTAGAGGCAGCAATAAGCTTGTTTCTCAAATCAAGGAATCAACAAAAATCCCTGTTCTTGGTCATTCTGATGGAATTTGTCATGTATTTGTTGACAAGTCTGCTAATATTGATATGGCAAAGCAGATTGTTAGGGATGCAAAAACTGATTATCCAGCAGCATGCAATGCAATGGAAACTCTTCTTGTGCACAAGGATCTATCAAATAATGGTGGACTTAATGAGCTTGTCCTTGAACTTCAGCGTGAAGGTGTTAAATTGTATGGTGGACCAAAAGCTAATGGCTTACTAAACATTGCTGAAACGAACTCTTTTCATCATGAGTATAGTTCACTTGCTTGCACAGTTGAAATTGTTGAAGATGTATTTGCTGCCATTGACCACATAAATCAACATGGAAGTGCTCATACTGATTGCATTGTTACAGAAGATTGTGAAGTTGCTGAGACTTTCTTAAGTCAAGTTGACAGTGCTGCTGTTTTCCACAATGCAAGTACTAGATTTTGTGATGGAGCACGCTTTGGGCTCGGTGCAGAGGTTGGAATAAGTACAAGTCGAATTCATGCTCGAGGCCCTGTAGGAGTTGAGGGTTTGTTGACAAATAGATGGATATTGAGAGGGAATGGGCATGTGGTTGATGGTGATCAAGGGATCATATATACTTACAAAGAGCTGCCACTAAAAACATAG 2340 0.4047 MNRTSYQCLPSFISVSQNKHKSKKKMELLQNGHKPFVVMKPSELPLTNNGFSILNSLSETQYLGNIDPSRVFVTKVKRLIVKVGTAVVTRSDGRLALGRIGALCEQLKELSTQGYEVILVTSGAVGLGKQRLRYRKLANSSFSDLQKPQGELDGKACAAVGQSSLMALYDTMFSQLDVTSSQLLVNDGFFRDAGFRKQLSDTVNSLLDLRVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSDPNSKLIHTYIKEKHQEEITFGDKSRLGRGGMTAKVNAAVCAAHVGIPVIITSGYATNNILRVLQGERIGTVFHKDAHLWINMKEVSAREMAVAAREGSRRLQLLKSEERSKILLAIADALEKNESTIRFENEVDVADAVASGYEKSLISRLTLKREKIYSLAKSVRKLADMEEPIGQILKRTELADKLILEKISCPLGVLLIIFESRPDALVQIAALAIRSGNGLLLKGGKEARRSNAILHKVITSVMPDTVGDKLIGLVTSRDEIPDLLKLDDVIDLVVPRGSNKLVSQIKESTKIPVLGHSDGICHVFVDKSANIDMAKQIVRDAKTDYPAACNAMETLLVHKDLSNNGGLNELVLELQREGVKLYGGPKANGLLNIAETNSFHHEYSSLACTVEIVEDVFAAIDHINQHGSAHTDCIVTEDCEVAETFLSQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWILRGNGHVVDGDQGIIYTYKELPLKT 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01697 779 CDD AAK_P5CS_ProBA 69 343 IPR041744 -
Cca01g01697 779 Hamap Glutamate 5-kinase [proB]. 77 346 IPR005715 GO:0005737|GO:0006561
Cca01g01697 779 TIGRFAM P5CS: delta l-pyrroline-5-carboxylate synthetase 70 778 IPR005766 GO:0003824|GO:0006561
Cca01g01697 779 Hamap Gamma-glutamyl phosphate reductase [proA]. 356 762 IPR000965 GO:0004350|GO:0006561
Cca01g01697 779 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 49 778 - -
Cca01g01697 779 SUPERFAMILY Carbamate kinase-like 77 342 IPR036393 -
Cca01g01697 779 Pfam Amino acid kinase family 77 322 IPR001048 -
Cca01g01697 779 TIGRFAM proA: glutamate-5-semialdehyde dehydrogenase 364 751 IPR000965 GO:0004350|GO:0006561
Cca01g01697 779 TIGRFAM proB: glutamate 5-kinase 77 348 IPR005715 GO:0005737|GO:0006561
Cca01g01697 779 PRINTS Glutamate 5-kinase family signature 114 128 IPR001057 GO:0005524|GO:0016301
Cca01g01697 779 PRINTS Glutamate 5-kinase family signature 158 186 IPR001057 GO:0005524|GO:0016301
Cca01g01697 779 PRINTS Glutamate 5-kinase family signature 198 219 IPR001057 GO:0005524|GO:0016301
Cca01g01697 779 PRINTS Glutamate 5-kinase family signature 237 264 IPR001057 GO:0005524|GO:0016301
Cca01g01697 779 PRINTS Glutamate 5-kinase family signature 296 316 IPR001057 GO:0005524|GO:0016301
Cca01g01697 779 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 574 720 IPR016163 GO:0016620
Cca01g01697 779 CDD ALDH_F18-19_ProA-GPR 358 758 IPR000965 GO:0004350|GO:0006561
Cca01g01697 779 ProSitePatterns Glutamate 5-kinase signature. 294 311 IPR019797 GO:0004349|GO:0006561
Cca01g01697 779 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 669 690 IPR020593 GO:0004350|GO:0006561
Cca01g01697 779 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE SYNTHASE 49 778 - -
Cca01g01697 779 SUPERFAMILY ALDH-like 357 761 IPR016161 GO:0016491
Cca01g01697 779 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 365 760 IPR016162 GO:0016491
Cca01g01697 779 Pfam Aldehyde dehydrogenase family 355 618 IPR015590 GO:0016491
Cca01g01697 779 Gene3D - 68 348 IPR036393 -
Cca01g01697 779 PIRSF P5C_synthetase 11 779 IPR005766 GO:0003824|GO:0006561
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01697 Cca-Chr1 39284021 39298334 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01697 K12657 - gmx:100798598 1344.72