Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01694 ATGGCCTCCGCCGACAAAACGAAGCCCTCCTCCGCGCTCTCGCTCCCCGTCAGCGTCGTCGTTTTGGGCATCGCCTTCATTTACGTCTCCACCGTCTTCGTCTTCATCGACCGTTGGTTCGGCCTCCTCTCCTCCCCTGGCATCATGAACGCCGCCGCCTTCACCGCCCTCGCCGCCGCCTGCGCCCTCACCTACCGCGCCGCCATTCTCACGGATCCGGGTCGGGTCCCCTCCACCTACGCCCCCGACGTCGAAGACGTCCACAGCCCCGTCCACGAGATCAAACGCAAGGGTGGAGATCTGCGATATTGCCAAAAGTGTTCTCACTATAAACCTCCCCGTGCACATCATTGCCGGGTTTGTAAAAGATGTGTTCTACGAATGGATCATCATTGCATTTGGATAAATAACTGCGTTGGTCTAGCAAACTATAAAGTCTTCTTCATTTCTGTCTTGTATGCTGTAATTGCCTGCATCTACTCCCTGGTCTTACTTGTGGGTAGTCTAACTTATGATGGCTCACAAGATGAAGAGAAAAATGGAAGCTCTTTCCGAACTGTATATGTAAGTTCTATTGAAAACAACTATGTATTCAACAAtttgttttctcttgatttttttctttccttttGCAGGTTCTTTCTGGACTGTTGCTGTTCCCCTTATCCATAG 672 0.494 MASADKTKPSSALSLPVSVVVLGIAFIYVSTVFVFIDRWFGLLSSPGIMNAAAFTALAAACALTYRAAILTDPGRVPSTYAPDVEDVHSPVHEIKRKGGDLRYCQKCSHYKPPRAHHCRVCKRCVLRMDHHCIWINNCVGLANYKVFFISVLYAVIACIYSLVLLVGSLTYDGSQDEEKNGSSFRTVYVSSIENNYVFNNLFSLDFFLSFCRFFLDCCCSPYP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01694 223 ProSiteProfiles DHHC domain profile. 102 152 - -
Cca01g01694 223 Pfam DHHC palmitoyltransferase 100 198 IPR001594 GO:0016409
Cca01g01694 223 PANTHER S-ACYLTRANSFERASE 10 191 - -
Cca01g01694 223 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 10 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01694 Cca-Chr1 39124725 39130692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01694 41 145 Lipid Metabolism Gene Families AT4G22750 41.593 2.02e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01694 K20029 - gmx:100798478 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01694 01 39124725 39130692 Cca01g01694 01 39124725 39130692 ECH