Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01693 ATGGAGGCAGATACTCAGAACCCATCTCAAAGTTACAGATTCTGTGTGGATGGAGTGCATGAGACCAACATTATTGAATGGAACAAGAAAAGAAAATTACAGAGTGATCAATTGGATTTGCTTAGACCAAAGCATAAATGCTGGGATGGGAATCCCTCTTCCGAACATGCTTTAATATTCGACGAAAATCCAGCGTTAGATAGCATGCAGATTTATGTACTTGAGGGTAGAACAGACGCAGAAAGCTCAGAATCTGAATCTGAATCTGTGAAAGACAGCAATAGTGTCTCTCAAGATTCTTTTACTGCCATGTCTGTAAATCAAGATGGTAAACATGTCGCTGATTCTGCAAAGACATACCAATATGAGAGACCTTCCACTTCTTTGGTTGGTTGTGATGGCTATAACAATGTCAAGGATAATCACCACTCTTTAGATGAATCTGCAGTTGATAAGGAATGTTCAGGTGAAGCACACACATCTTTTTACAAAGAATGTAATCCATCTTATCATTATGCTGATTTACAAGCTCTCAAGAATCTTGAGGAGCAGATTTTAGAAATTGAAAGCCGTAGAAGTCACGTGTACCAAGAAAATGCCAAAGAAAGTACTGAGGAGTCCATAGATATGGAATTTGAAGAACGTTTTTCCCAAGGGGAAAATAGTAACATGTATGTCCTTTCATCTGGAAGATGGAATTTAAACAAAGAGGCTCAATCAAGCACAAGGCCACCAACAATTGATCAAGAATTTGAGCAGTACTTTTCCATGCTTATGCTTTAG 783 0.3844 MEADTQNPSQSYRFCVDGVHETNIIEWNKKRKLQSDQLDLLRPKHKCWDGNPSSEHALIFDENPALDSMQIYVLEGRTDAESSESESESVKDSNSVSQDSFTAMSVNQDGKHVADSAKTYQYERPSTSLVGCDGYNNVKDNHHSLDESAVDKECSGEAHTSFYKECNPSYHYADLQALKNLEEQILEIESRRSHVYQENAKESTEESIDMEFEERFSQGENSNMYVLSSGRWNLNKEAQSSTRPPTIDQEFEQYFSMLML 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01693 260 MobiDBLite consensus disorder prediction 77 98 - -
Cca01g01693 260 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 1 1 260 IPR037766 GO:0009639
Cca01g01693 260 Coils Coil 178 198 - -
Cca01g01693 260 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 1 1 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01693 Cca-Chr1 39087939 39091374 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01693 - - vun:114165838 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01693 01 39087939 39091374 Cca01g01693 01 39087939 39091374 ECH