Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01687 ATGGAAACAAGTATGGGTCTTGCATGCTTTGGTTGGAGTTTGATTTACATAATCAAAGCTTTTGGTTTTCTGATGGAAATGGAGAATGAGAATGGCATCACACAACAGGCTCCGAGACCAAAATATGATTGCCTCCTATTTGATTTAGATGATACTTTGTATCCCCTCAATTCTGGTCTTACAAATGAAATTGTCCTAAATATTCAAGACTACATGGTTGAAAAGCTTGGCATAGAACCAAGTAAAACAGAAGAATTGGCCAACCTTGTTTACAATAACTATGGAACTACTATGGCTGGTCTGAGGGCAATTGGATACGACTTTGACTATGAAGAATATCACAGTTTTATTCATGGGAAATTACCTTATGAGAACTTGAAGCCAGACCCAGTTCTAAGAAATCTGCTTCTTAGCCTGCCTTATAGGAAGCTTATCTTCACCAACGGAGACAAAGTCCATGCGATTAAGGCACTCAAAAGGCTTGGGTTGGAAGACTGCTTTGAAGGAATCACATGCTTTGAGACCCTTAATCCTGTCCACAAGAGCACTGTTTCTGATGATGAAGATGACGTGGAGTTTGTGGGTTCAAAGACCACAAATCCAAATGTAACACCTGAAAATGGTGTAAAAAGCTCTGAAATCTTTGACATCATACAGCATTTTGCTCAACCTGATCCCACTACAGTCCTTCCAAAGACACCAATTATCTGTAAACCATCAGAACATGCCATTGAACTTACCCTCAAGTTAGCCAACCTTAACCCACAAAGAACCTTGTTCTTTGACGATAGTGTCCGCAACATACAAGCTGGGAAACGAGTGGGTCTTCACACTGTGCTGGTTGGTACATCCCACAGAGTTAAAGGTGCTGATTATGCAGTGGAAAGCATTCACAATCTTAAGGAGGTAGTGCCTGAACTGTGGGAGACTAACATAAAACCACAAGTTGCAATCCCGGGGACTGAGAAGCTTGCAGTGGAGACACCAGTGATAGCCTGA 999 0.4154 METSMGLACFGWSLIYIIKAFGFLMEMENENGITQQAPRPKYDCLLFDLDDTLYPLNSGLTNEIVLNIQDYMVEKLGIEPSKTEELANLVYNNYGTTMAGLRAIGYDFDYEEYHSFIHGKLPYENLKPDPVLRNLLLSLPYRKLIFTNGDKVHAIKALKRLGLEDCFEGITCFETLNPVHKSTVSDDEDDVEFVGSKTTNPNVTPENGVKSSEIFDIIQHFAQPDPTTVLPKTPIICKPSEHAIELTLKLANLNPQRTLFFDDSVRNIQAGKRVGLHTVLVGTSHRVKGADYAVESIHNLKEVVPELWETNIKPQVAIPGTEKLAVETPVIA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01687 332 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 27 332 - -
Cca01g01687 332 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 27 332 - -
Cca01g01687 332 SUPERFAMILY HAD-like 41 309 IPR036412 -
Cca01g01687 332 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 43 281 IPR010237 -
Cca01g01687 332 Gene3D - 107 308 IPR023214 -
Cca01g01687 332 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 236 281 IPR006439 -
Cca01g01687 332 Pfam Haloacid dehalogenase-like hydrolase 45 176 IPR041492 -
Cca01g01687 332 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 36 310 - -
Cca01g01687 332 SFLD C1.5.3: 5'-Nucleotidase Like 36 310 IPR010237 -
Cca01g01687 332 Pfam HAD-hyrolase-like 238 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01687 Cca-Chr1 38749252 38754732 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01687 K07025 - gmx:121174947 504.597