Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01678 ATGGGATTGTTGAATGAAGAGCTTGTTGAAGACAGACTTGTGAATCGTTCATTGCAAAAGGGGTTGCTTTTGGAATTCAAGAAGGATTCTGATAGAGTATTGCTAGCAGTAGCTCAGAGACCTGATGGCAAGAAGAACTGGATGGTTTCTGATCAGAATGATGTCACTTCTTCCATCAAACCGCAACAAGTGACATATATTGTTCCTGGTGTTGACAATTTTGACCAAGCAGATATTGCAGATTTTGCTCAGAAGGCTCAGGATAACATGGACCCATCACTACTTGAATTTGCTTGGATTGAGCTCCTCGAGAAGAATAAGTCTGTGACAGTTGAAGAGTTGGCTGAGATAATTTTTGGCAGTGCTGAGCCCCTTGAGAGCTATTCTGCTCATCTCTTGCTATCAAAAGATGAAGTATACTTTACTGTACTGGAGACTAAAGGATGCCGCTCCATTTATGGTCCTCGACCAAGTGGGCAGGTTGAGGAGCTCATTCGTAGGAAGCTTGCAAAGGAGGCCGCTGAGAAAGAACTAAAGGAGTTTATTGAATTACTGACCTCTGCAAAGTCAATGTCTTCACAAGATAAACCTCCAAAATCTTCATGGACAATTGATGAGAAAATTTGGAACAGAATCGAGTCACTTGAAGCATATGCTATTGATACATGTAAAAATGACGAACAAAGGAAAACAGCTGGGATGGTAATTTTTTCCCTCAATTGTTATGTAGGCATGTAA 738 0.4092 MGLLNEELVEDRLVNRSLQKGLLLEFKKDSDRVLLAVAQRPDGKKNWMVSDQNDVTSSIKPQQVTYIVPGVDNFDQADIADFAQKAQDNMDPSLLEFAWIELLEKNKSVTVEELAEIIFGSAEPLESYSAHLLLSKDEVYFTVLETKGCRSIYGPRPSGQVEELIRRKLAKEAAEKELKEFIELLTSAKSMSSQDKPPKSSWTIDEKIWNRIESLEAYAIDTCKNDEQRKTAGMVIFSLNCYVGM 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01678 245 Coils Coil 171 191 - -
Cca01g01678 245 PANTHER RIBONUCLEASE 19 236 - -
Cca01g01678 245 PANTHER EXORIBONUCLEASE II, MITOCHONDRIAL 19 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01678 Cca-Chr1 38497262 38499353 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01678 K01147 - ccaj:109788619 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01678 01 38497262 38499353 Cca01g01678 01 38497262 38499353 ECH