Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01662 ATGGATAAGAACATTTTTTCAGACTTGGATAGTTTTCCCGAAGAAGATAAGCAAAGAATGTCCACCATGGTAGACCAGCTCCAATTCCGAGACAGTCTAAGGATGTATAATTCATTAGTGGAGAGATGTTTCAAGGAGTGTGTCAATTCATTCTATCGGAAATCCCTGACCAAGCAAGAGGAAACTTGTGTTCTCAGATGTGCTCAAAAATTCTTGAGGCTTTCAATGCAAGTTGGTTTGAGATTTTCAGATCTCAACCAAGGAGCCTCTACGACAGATAAAGGTGTTTATGAATAG 297 0.3939 MDKNIFSDLDSFPEEDKQRMSTMVDQLQFRDSLRMYNSLVERCFKECVNSFYRKSLTKQEETCVLRCAQKFLRLSMQVGLRFSDLNQGASTTDKGVYE 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01662 98 Pfam Tim10/DDP family zinc finger 24 83 IPR004217 -
Cca01g01662 98 Gene3D Mitochondrial import inner membrane translocase subunit tim13 like domains 7 92 IPR035427 -
Cca01g01662 98 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B 1 93 - -
Cca01g01662 98 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9 1 93 - -
Cca01g01662 98 SUPERFAMILY Tim10-like 28 88 IPR035427 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01662 Cca-Chr1 38370997 38372815 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01662 K17777 - gmx:100785421 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01662 01 38370997 38372815 Cca01g01662 01 38370997 38372815 ECH