Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01655 ATGACGGCGTTTGAGCGTGAAAGCCACCCTCCgtttccgttactgttagtgttaccgttactgttactCTCTCCGACGAATGCCTCCATCCACGACTACTCCAACGAGGCCTTCACCCACCGCTCCGACGCCTTCTTCTTCCACGGCGGCAGCGAGGCCCTCTTCGCCAAATCCTTCATCAGGTTCGAAACGGTGACGTTCACGCGCCCTCGCGAATCCGCCAGCGTGCACGGCTCGATGCAGCAGAACTCGGGGCTCGTGGAGGCCATAGTCCTCGAGGTTCGGGATCGGAACCGGATCGGAGGCACGTTCCTCAAATCCGATTTGCTCTGCTGCGATCCCAAGCTCGCCAAGGAAGGAAACTGCAACCTCGGCGAAGTCATTATCCAGAAGAATCCCGATAACCCCCAATTCCCCAAACGCATCAAGACCTTCTTTCAGGGAACCAACGACGAGATCAAGATGGAGACGCAAACCTTGGAGATCAACGCCACCGGGATGTACTACCTCTACTTCATGTTCTGCGACCCTTCGCTTAAGGGCACCACCATCCAGGGAAGGACCGTGTGGAGAAACCCTAAAGGTTACTTGCCTGGGAAAATGGCACCTCTTATGACCCTTTATGGCTTTATGTCTCTAGCTTACTTGTTATTAGGGCTTGCTTGGTTTTTGAGGTTTGTTCAGTTCTGGAAGGATATCATTCACTTGCATTATCATATCACTGCTGTTATTGCGCTTGGGATGTGTGAGATGGCTGTGTGGTATTTTGAGTATGCTAATTTCAACTCCACTGGGGCTAGGCCCATGGGGATTACCCTCTGGGCAGTTACCTTTACCTCTGTTAAGAAGACTCTCTCGCGGCTGCTGCTGTTGGTTGTGTCCATGGGGTATGGGGTTGTTCGCCCCACGCTCGGTGGGCATGGGATTGCTTACAGAGTGTTGCTGCTTGGCTTGTTCTATTTTGTTGCCTCGGAGGCGCTTGAGCTTGTTGAGCATTTGGGGAATATTAATGACTTCTCCGGGAAGACTAAGCTGCTTTTGGTGCTCCCTGTCGTTTGTCTCGATTCCTGCTTCATTCTGTGGATTTTCTCGTCGTTGTCCAAAACCTTGGAGAAACTGCAGACGAGGAGAAACTTGGCTAAACTGGAGCTTTACCGAAAGTTTACAAACACGCTTGCGGTGTCTGTGCTGCTGTCCATTGCGTGGATTGGCTTTGAGCTATACTTCAATGCTACCGATCCATTGAGTGAGCTGTGGCAAATTGCTTGGATTATTCCAGCTTTCTGGTCCCTGCTTTCATATGCCCTCTTGCTGGTGATATGTGTCCTTTGGGCTCCTTCTCGGAACCCTACTAGATATGCATACATGGAGGAAACAGGTGATGACTTTGATGAGGAGGGCATCTCTCTGACGAGCAGTGTAGCGAAGATAAGTGGGGATGTGGCAGCCAAGCTTGATCGGAAGGAAAGGAAGGGTTCAAGTGCCACAGATCATGCCTTTGGAGAAGATATTGAGGAAGATAAGCGAGAGTAA 1533 0.4997 MTAFERESHPPFPLLLVLPLLLLSPTNASIHDYSNEAFTHRSDAFFFHGGSEALFAKSFIRFETVTFTRPRESASVHGSMQQNSGLVEAIVLEVRDRNRIGGTFLKSDLLCCDPKLAKEGNCNLGEVIIQKNPDNPQFPKRIKTFFQGTNDEIKMETQTLEINATGMYYLYFMFCDPSLKGTTIQGRTVWRNPKGYLPGKMAPLMTLYGFMSLAYLLLGLAWFLRFVQFWKDIIHLHYHITAVIALGMCEMAVWYFEYANFNSTGARPMGITLWAVTFTSVKKTLSRLLLLVVSMGYGVVRPTLGGHGIAYRVLLLGLFYFVASEALELVEHLGNINDFSGKTKLLLVLPVVCLDSCFILWIFSSLSKTLEKLQTRRNLAKLELYRKFTNTLAVSVLLSIAWIGFELYFNATDPLSELWQIAWIIPAFWSLLSYALLLVICVLWAPSRNPTRYAYMEETGDDFDEEGISLTSSVAKISGDVAAKLDRKERKGSSATDHAFGEDIEEDKRE 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01655 510 Pfam Lung seven transmembrane receptor 162 450 IPR009637 GO:0016021
Cca01g01655 510 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 14 510 IPR009637 GO:0016021
Cca01g01655 510 MobiDBLite consensus disorder prediction 486 510 - -
Cca01g01655 510 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN 14 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01655 Cca-Chr1 38235084 38239558 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01655 - - gmx:100816334 897.501