Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01635 ATGAGAAGGTCAGGGTGGTGGTTGCTCAGAAATGCAACAAAGCAGAGCCTCAATACCCACCGAATCCTCTCTACTTCTCAACACGTCGTTCTCGATAACCCCAATCACATGAACAATCACAATCAGGTTTTGGTCCAAGGAGATGGCTGCTCTAGAATCGCCATTCTCAACAGACCCTCTGCTCTCAACGCCTTCAACACCAGCATGGTGGCTACGCTGCATAAATTTTATAGGAGTTGGGAAGATAACCCTGACATTGGTTTTGTCATGGTGAAGGGCAGTGGACGAGCATTTGGAGCTGGCGGAGATATTGTTGCGCTTTACCATTTGATAAAAAAAGGGAATATGGAAGCCTGTAAAGAATTTTTTAGAACAGCATATAGTTTTATATACCTGATAGGTACATATTTGAAGCCACAAGTGGCTCTACTGAATGGCATTACCATGGGTGGTGGAGCTGGAATATCAATCCCTGGGACATTCCGAGTTGCAACAGACAAAACTGTTTTTGCTATCCCTGAAGTTCATATTGGATTCCATCCTGATGCCGCAGCATCTTTTTACCTTTCACATTTACCTGGTCACTTAGGAGAGTACTTGGCTCTGACAGGGGAAAAGCTCAACGGAGTAGAGATGGTTACCTGTGGGCTTGCTACACACTATTCATCAAGTGCAAGGCTTCCTTTAATAGAAGAACAGCTTGGGAAATTGGTTACTGATGATCCGTCTGCCATTGAAACCACTTTAGAACAGTATGGTGAACTTGTCCATCCAGACAGCAGCAGCGTACTGCAAAGGATTGAAATTCTAGATAAATGCTTTTGCCATGACACAGTTGAAGAGATTGTTGATGCGATGGAAAATGCGGCAAGTGAAACAAATGATCCATGGTGCATTTCTACCTTAAATAGACTTAAAGAAGCTTCTCCATTGAGCTTGAAGGTTTCCTTAAGATCTATACGGGAAGGTAGATTTCAGACACTTGATCAATGCTTGATGCGTGAGTACCGTATGACTTTACAATCAATACACATGCAGATATCTGGGGACTTCTGTGAGGGAGTGAGGGCTCGCGTGGTGGACAAGGACTTTGCACCAAAGTGGGATCCTCCAACCCTGGACAAGGTGTCTCAAGATATGGTGGATCAATACTTCTTACCTCTGACTGAATCTGAACCTGATCTGGAGCTGCCAACAAAAAGTCGTGAAGCTTTTTTGTAG 1221 0.4398 MRRSGWWLLRNATKQSLNTHRILSTSQHVVLDNPNHMNNHNQVLVQGDGCSRIAILNRPSALNAFNTSMVATLHKFYRSWEDNPDIGFVMVKGSGRAFGAGGDIVALYHLIKKGNMEACKEFFRTAYSFIYLIGTYLKPQVALLNGITMGGGAGISIPGTFRVATDKTVFAIPEVHIGFHPDAAASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLATHYSSSARLPLIEEQLGKLVTDDPSAIETTLEQYGELVHPDSSSVLQRIEILDKCFCHDTVEEIVDAMENAASETNDPWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLMREYRMTLQSIHMQISGDFCEGVRARVVDKDFAPKWDPPTLDKVSQDMVDQYFLPLTESEPDLELPTKSREAFL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01635 406 Gene3D - 37 401 - -
Cca01g01635 406 SUPERFAMILY ClpP/crotonase 39 371 IPR029045 -
Cca01g01635 406 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL 13 405 - -
Cca01g01635 406 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 13 405 IPR032259 GO:0003860
Cca01g01635 406 CDD crotonase-like 43 227 - -
Cca01g01635 406 Pfam Enoyl-CoA hydratase/isomerase 52 385 IPR045004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01635 Cca-Chr1 37496987 37509236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01635 40 406 Acyl Lipid Metabolism Gene Families AT4G31810 63.243 2.20e-180 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01635 K05605 - gmx:100801676 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01635 01 37496987 37509236 Cca01g01635 01 37496987 37509236 ECH