Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01633 ATGAACGTTATTTTTCGCGTTTGGCAGAAACTGGTTTCGATGGTGCGAGCTCCGAATCCAGAGCATCTGGAATCGACCACGCCCTTAGTCGTGAGTCACGTACAGGGAGAGGGTTTGACAAATGATGGGATTATTCCTCATATATTTTCATCCATGCCAGCTCTCAATGATGCTGCTTCTTATCTTGCACAAACAACATCATACTTAACTGGTTGTTTCTCTGATTATTCAGGCAAGGTTCTTTTTTATTTATCTATAGAACATTCACCCAGACGTCCTGGTTCTTCTGGAAGTCATGCACAAGAACTTGTGGAGTTTTCTTCTGCAGAAACTGATGCATCTTCATCTACCGAAATCGAGCGTATTCCCCTTTTAACTAATGTTGAGTCATCTAGTGCTGCATCTTCTTCAGCTACACATATGCATGATGAAATCACGAGGACTTCTGGTGGAAATCTGTCACAAAATTCCAGTGCACTTGTTGAATCAAATCGTACTGGACAAAGTGGCATCTCCATTTTCCAAAGCCTGATTGAACGTGCTCGAAGGACTGTGCGTGGATCTGCAGATGATATAGGTTGGCTTCAACGAATGCCTCCGGTTGAAGATGGAACAGAGAGGTTCCTGGAAATTCTGGACAACATCAAGCATGGTGTTCACAGGTTACCAAATTCGGTGGTTTATTTGTTAATTCCAGGTCTTTTCAGTAATCATGGTCCACTTTACTTTGTCAATACAAAAGTCAGTTTTTCAAAGATGGGTTTGGCCTGTCATATCGCAAAGATTCATAGTGAGTCTTCAGTCGAGAAAAATGCCAGAGAACTAAAAGAGTACATTGAGGAAATTTATTGGGGTTCAAAGAAACGTGTTTTGCTTCTTGGACATAGCAAAGGAGGAGTAGACGCAGCAGCTGCTTTATCATTGTATTGGTCTGATTTGAAAGATAAAGTTGCTGGGTTGGCATTAGCACAAAGCCCCTATGGTGGAACCCCTATCGCTTCAGATCTTCTTCGAGAAGGACAGCTTGGTGATTATGTAAATGTACGGAAACTTACTGAGATTATTATCTGTAAAGTGATTAAGGGTGACATGCGAGCCTTAGAAGACTTAACATATGAAAGGCGGAGGGAGTTTTTAAAGGAGCATCATCTGCCAGAAGAAGTCCCTATTGTTTCCTTTCGGACCGAAGCTGGCATTTCCCCTGCTGTTCTAGCCACATTGTCTCATGTTGCACATGCCGAACTACCTGCAGTTGCTCCAGCAGGTGAACCAAGAAAACTCCCTGTAGTGATGCCCCTTGGTGCTGCTATGGCTGCTTGTGCACAGTTGCTGCAGCTGAGATACGGTGAGAAAAGTGACGGGCTTGTGACATGTCGAGACGCAGAGGTTCCTGGATCTGTTGTGGTGCGGCCTAAACGAAAATTGGACCACGCTTGGATGGTTTATTCTTCCCTAAATGATGACCCTTCTGAAGGAGATGCATCTCAGGTGTGTGAAGCTCTCTTGACTCTACTCGTGGAAATCGGACAGAAAAAGATGCATGAGCTAGCAATGAAAGAAGAATGA 1566 0.4374 MNVIFRVWQKLVSMVRAPNPEHLESTTPLVVSHVQGEGLTNDGIIPHIFSSMPALNDAASYLAQTTSYLTGCFSDYSGKVLFYLSIEHSPRRPGSSGSHAQELVEFSSAETDASSSTEIERIPLLTNVESSSAASSSATHMHDEITRTSGGNLSQNSSALVESNRTGQSGISIFQSLIERARRTVRGSADDIGWLQRMPPVEDGTERFLEILDNIKHGVHRLPNSVVYLLIPGLFSNHGPLYFVNTKVSFSKMGLACHIAKIHSESSVEKNARELKEYIEEIYWGSKKRVLLLGHSKGGVDAAAALSLYWSDLKDKVAGLALAQSPYGGTPIASDLLREGQLGDYVNVRKLTEIIICKVIKGDMRALEDLTYERRREFLKEHHLPEEVPIVSFRTEAGISPAVLATLSHVAHAELPAVAPAGEPRKLPVVMPLGAAMAACAQLLQLRYGEKSDGLVTCRDAEVPGSVVVRPKRKLDHAWMVYSSLNDDPSEGDASQVCEALLTLLVEIGQKKMHELAMKEE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01633 521 Gene3D alpha/beta hydrolase 225 507 IPR029058 -
Cca01g01633 521 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 37 521 - -
Cca01g01633 521 SUPERFAMILY alpha/beta-Hydrolases 229 359 IPR029058 -
Cca01g01633 521 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 37 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01633 Cca-Chr1 37372166 37391961 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01633 - - gmx:100811795 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01633 01 37372166 37391961 Cca01g01633 01 37372166 37391961 ECH