Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01618 ATGGCTGCCACAACTCACATAGCCATAGTCACGGTCCCAGTATACAGCCATCTACGTTCAATTCTCGAGTTCTCCAAGCGACTAGTTCATCTCCACCATGACATCAATGTCACATGCATCAACCCTACATTTGGTTCACCTTGCAACAACACCAAATCCCTTTTCGATTCTCTTCCCTCAACAATTAACTACATGTTCCTACCACCAATAAACTTGGAGGACCTTCCACATGACACTCACCCCGCAATCCAAGTTCAAGTCACCATCTCTCGTTCTTTACCTCTAATCTATGATGCATTGAAGACACTGCATGCTAGCAGAAGACTCGTTGCAGTCATTTCTGATGGTTTGATGTCACAAGTGTTGCACTTTGGCAAGGAACTTGATACCTTGTCCTACACGTATTTCCCATCCACAGCTATGTTACTATCACTATGCTTGTATTCTTCCATGCTAGACAAGACAATTTCTTGTGAGTACAAAGACCTTTTAGAACCTATGGAGATTCCTGGTTGCATTCCTATTCTTGGGACTGATCTACCGGACCCTCTTCAAGATCGATCAGGTGTAGCATACAAGGAGTTTCTTGAAGGTAATGAAAGGTTCTATTTAGCTGATGGTATATTGGTCAATAACTTTTATGAGATAGAAGAAGAGACCATAAAGGCCTTACAACAAGAAGAAGGAAGAGGAATCCCTTCTGTTTATGCAATTGGACCCTTTGTGCAGCAAAAGGTGGCATGCAACGACGAAAGTGACAAAGAATGTTTGAGATGGTTAGACAAGCAACAACACAGTTCCGTCTTGTATGTTTCTTTCGGAAGTGGTGGCACACTTTCTCATGACCAAATAAACGAGCTTGCTTTGGGTTTGGAACTAAGTGGCCAAAGATTCTTGTGGGTGTTAAGACCACCAAACAAGTTTGGAATCATTAACGACATTGGTGCTAAAAATGAGGACCCTTTTCAGTTTTTACCAGAAGGGTTTCTGCAGAGAACAGAAGGGAGTAGTTTGGTGGTTCCTTATTGGGCATCTCAGGTTGAAATCCTAGGTCATGGTGCGATTGGTGGGTTCCTATGTCACTGTGGTTGGAACTCCACGCTTGAAGGTGTTGTGCTTGGGGTTCCACTCATAGCATGGCCACTCTTTGCGGAGCAAAAGATGAATGCTGTTTTGCTGACAAATGGTTTGAAAGTGGCTCTTAGGGTTAAGGTGAATGAGAAGGGTATAGTGGAAAGGGAAGAGGTAGCTAGGGTTATAAAGAATCTAATGGTGGGTGAAGAAGGGGAAGAAATTCGTAAGAGAATGAAAAAGTTGGAAGATGCTGCTGCTAATGCGTTGAAGGATGATGGATCCTCAACAAGAACCCTAACACAGTTGGTGCACAAATGGAAACGTTTAACTTTGGGAGTTGCATGA 1419 0.4306 MAATTHIAIVTVPVYSHLRSILEFSKRLVHLHHDINVTCINPTFGSPCNNTKSLFDSLPSTINYMFLPPINLEDLPHDTHPAIQVQVTISRSLPLIYDALKTLHASRRLVAVISDGLMSQVLHFGKELDTLSYTYFPSTAMLLSLCLYSSMLDKTISCEYKDLLEPMEIPGCIPILGTDLPDPLQDRSGVAYKEFLEGNERFYLADGILVNNFYEIEEETIKALQQEEGRGIPSVYAIGPFVQQKVACNDESDKECLRWLDKQQHSSVLYVSFGSGGTLSHDQINELALGLELSGQRFLWVLRPPNKFGIINDIGAKNEDPFQFLPEGFLQRTEGSSLVVPYWASQVEILGHGAIGGFLCHCGWNSTLEGVVLGVPLIAWPLFAEQKMNAVLLTNGLKVALRVKVNEKGIVEREEVARVIKNLMVGEEGEEIRKRMKKLEDAAANALKDDGSSTRTLTQLVHKWKRLTLGVA 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01618 472 Coils Coil 429 449 - -
Cca01g01618 472 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 248 403 IPR002213 GO:0008194
Cca01g01618 472 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 466 - -
Cca01g01618 472 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 460 - -
Cca01g01618 472 PANTHER TRANSFERASE, PUTATIVE-RELATED 1 460 - -
Cca01g01618 472 CDD GT1_Gtf-like 6 464 IPR002213 GO:0008194
Cca01g01618 472 ProSitePatterns UDP-glycosyltransferases signature. 343 386 IPR035595 -
Cca01g01618 472 Gene3D Glycogen Phosphorylase B; 6 453 - -
Cca01g01618 472 Gene3D Glycogen Phosphorylase B; 254 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01618 Cca-Chr1 37024206 37026439 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01618 4 465 Glycosyltransferase AT1G01420 46.667 8.37e-143 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01618 K08237 - gmx:100819727 799.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01618 01 37024206 37026439 Cca01g01618 01 37024206 37026439 ECH