Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01617 ATGGATTCAGGCGGCGTCGTAGGAGCCGCGAGCCACCCTCCACCGCAGTTCTACCAAAACGTCGTCGTAATGCGCCACGGCGATCGCATCGACAACTTCGAGCCCCACTGGGTTTCCCAAGCGGCCCGGCCCTGGGACCCACCCCTGGTCCAACAGGGCCTGGCCCGGGCCTTCGTCACGGGCCGCCAGTTCCGTAACAACTTACCCTTCGCCTTCCACCGCGTCTTCGTCTCTCCCTTCCTCCGATGCGTCCAAAccgccgcccaagccgtcaccgccctcgccgccgtcgccgacgacgccAACAAACTCACCGCCAATGACGTCACCATCGATCCCTCCAAACTCAAGGTCTCTGTTGAATATGGGTTATGCGAAATGATGAGCAGGGCAGCAATCAGGCTTGAGGTTGCTCCTAAAGATGGAAATTGGGGTTTTGATATTTCGGAGCGTGAGGCCTTGCTTCCGGCAGGGACAGTAGATAAGAATGTGGAAAGGGTCTATAAGGAGTTGCCCAAGTGGGAAGAGGATCCAGAATTGCAAACAAGGCCTAGATATAAGCAAATAGTTAAAGACCTTGCAGACAAATATCCAACTGAGAACTTGCTGCTTGTTACACATGGGGAAGGAGTTGGGGTGGCTTTTTCTTCATTCAAAAAGGGTGCTACGGTGTACGAAGTTGATTACTGTGGATACGTCCAACTCAGACGCCCAATTTTCAAGAAAGACCAATCATTTACTGCAGGAGAATTTGAAGTACTTAATGACAATGGTCAAACTGGCGTACATTTCTTCCTAAAACAAACGTAA 810 0.4778 MDSGGVVGAASHPPPQFYQNVVVMRHGDRIDNFEPHWVSQAARPWDPPLVQQGLARAFVTGRQFRNNLPFAFHRVFVSPFLRCVQTAAQAVTALAAVADDANKLTANDVTIDPSKLKVSVEYGLCEMMSRAAIRLEVAPKDGNWGFDISEREALLPAGTVDKNVERVYKELPKWEEDPELQTRPRYKQIVKDLADKYPTENLLLVTHGEGVGVAFSSFKKGATVYEVDYCGYVQLRRPIFKKDQSFTAGEFEVLNDNGQTGVHFFLKQT 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01617 269 Gene3D - 18 241 IPR029033 -
Cca01g01617 269 PANTHER - 17 267 - -
Cca01g01617 269 CDD HP 21 85 - -
Cca01g01617 269 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 17 267 - -
Cca01g01617 269 PIRSF PRIB5 9 269 IPR012398 -
Cca01g01617 269 Pfam Histidine phosphatase superfamily (branch 1) 22 94 IPR013078 -
Cca01g01617 269 SUPERFAMILY Phosphoglycerate mutase-like 20 219 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01617 Cca-Chr1 36997134 37000806 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01617 - - ccaj:109788472 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01617 01 36997134 37000806 Cca01g01617 01 36997134 37000806 ECH