Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01615 ATGGAAGTTGATGGCAGGTTTCTGAGCACATGTCTCCTCCTTGCGGCCACAATCCTTGTGGCCAAACTCATATCAGCCTTCATAGTGCCCAAATCCAGAAAGAGGGTACCCCCAGTAATGAAGGGGTGGCCCCTCATTGGAGGGCTTTACCGGTTCCTCAAAGGGCCAATTTTTATGCTCCGTGAGGAGTACCCTAAGCTTGGGAGTGTTTTCACCCTGAAATTGTTTCACAAAAACATCACCTTTTTGATTGGCCCTGAGGTTTCTGCACACTTTTTCAAGGCCCCAGAGAGTGATCTTAGCCAGCAAGAGGTGTACCAGTTCAATGTGCCAACTTTTGGACCTGGGGTGGTGTTTGATGTTGATTACTCCGTGAGGCAGGAGCAGTTCAGGTTCTTCACTGAGGCTCTTAGGGTGAACAAACTCAAGAGTTATGTCAATCAGATGGTTGCAGAAGCTGAGGACTATTTCTCAAAGTGGGGACCTAGTGGTGAGGTTGATTTGAAGTATGAGCTTGAGCATCTGATCATCTTGACGGCCAGTAGATGTCTCTTGGGGCGTGAAGTTCGTGACAAACTCTTTGATGATGTCTCTGCATTGTTCCATGACCTGGATAATGGGATGCTTCCAATCAGCGTTCTCTTCCCATACTTGCCAATCCCAGCTCACAAGCGCCGTGACCAGGCACGCAAGAAGCTGGCTGAAATCTTTGCAACCATCATAGCTTCTCGCAAAAGTGCCAACAAATCAGAAGATGACATGTTGCAGTGCTTCATTGACTCAAAATACAAAGATGGTCGCCAAACGACAGAAGCTGAAGTGACTGGACTCCTCATTGCTGCGCTATTTGCAGGACAACACACAAGTTCTATTACCTCCACTTGGACTGGTGCATATCTGCTGAGTAACAACCAGTACCTTTCAGCTGTGCAGGAGGAGCAGAAGAAGTTGATGGAGAAGCATGGGGACAAAGTTGATCATGATGTTTTGGCTGAAATGGATGTGCTGTATAGGTGCATCAAAGAAGCTTTGAGACTCCACCCTCCACTGATTATGCTGCTGAGAAGCTCACACAGTGATTTTAGCGTCACGACAAAAGAGGGGAAAGAGTATGACATCCCCAAGGGTCATATAATTGCCACATCACCTGCTTTTGCAAATAGGCTAGGTCACATTTTCAAGGACCCTGACAGGTATGATCCCGATCGGTTCGCTGTTGGGAGGGAAGAAGACAAGGTGGCAGGTGCATTCTCCTACATTTCATTTGGCGGCGGCAGACATGGATGCCTTGGGGAGCCTTTTGCTTATCTGCAGATAAAAGCAATTTGGACTCATCTGCTGAGGAATTTTGATCTTGAGTTGGTGTCACCTTTTCCTGAGATAGATTGGAATGCCATGGTTGTAGGAGTGAAGGGAAAAGTTATGAAGGTTGTGGACAACAAAGCGGATGCTGGGCTAGGTTTTTTTTTTGATTCGAGGGAATCACTGGTACTAAGAGGGTTCACAACACTTATGCACCCTATTCAACCAAATGAGCTAAACTCACTTGGTAACAGAGCCAGGATTCTGTCACAGGACAAGGAGCATTTTGCTAAATTAGCTGTGGATGTTGTAATGACTAAAGGGAAGCATGGATTTAGAATTGAAGGCTATAATCAATATTGA 1665 0.4619 MEVDGRFLSTCLLLAATILVAKLISAFIVPKSRKRVPPVMKGWPLIGGLYRFLKGPIFMLREEYPKLGSVFTLKLFHKNITFLIGPEVSAHFFKAPESDLSQQEVYQFNVPTFGPGVVFDVDYSVRQEQFRFFTEALRVNKLKSYVNQMVAEAEDYFSKWGPSGEVDLKYELEHLIILTASRCLLGREVRDKLFDDVSALFHDLDNGMLPISVLFPYLPIPAHKRRDQARKKLAEIFATIIASRKSANKSEDDMLQCFIDSKYKDGRQTTEAEVTGLLIAALFAGQHTSSITSTWTGAYLLSNNQYLSAVQEEQKKLMEKHGDKVDHDVLAEMDVLYRCIKEALRLHPPLIMLLRSSHSDFSVTTKEGKEYDIPKGHIIATSPAFANRLGHIFKDPDRYDPDRFAVGREEDKVAGAFSYISFGGGRHGCLGEPFAYLQIKAIWTHLLRNFDLELVSPFPEIDWNAMVVGVKGKVMKVVDNKADAGLGFFFDSRESLVLRGFTTLMHPIQPNELNSLGNRARILSQDKEHFAKLAVDVVMTKGKHGFRIEGYNQY 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01615 554 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Cca01g01615 554 SUPERFAMILY Cytochrome P450 32 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01615 554 PANTHER STEROL 14-DEMETHYLASE 9 481 - -
Cca01g01615 554 PANTHER CYTOCHROME P450 26 9 481 - -
Cca01g01615 554 Gene3D Cytochrome P450 26 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01615 554 Pfam Cytochrome P450 37 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01615 554 PRINTS E-class P450 group IV signature 58 81 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01615 554 PRINTS E-class P450 group IV signature 333 349 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01615 554 PRINTS E-class P450 group IV signature 275 301 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01615 554 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01615 554 PRINTS E-class P450 group IV signature 429 447 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01615 554 PRINTS E-class P450 group IV signature 413 429 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01615 554 PRINTS E-class P450 group IV signature 371 385 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01615 554 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01615 554 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01615 554 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01615 554 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01615 Cca-Chr1 36966001 36970557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01615 1 475 Miscellaneous Gene Families AT1G11680 81.002 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01615 K05917 - gmx:100810799 904.82