Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01614 ATGGGTTCTTCTGTTCAACATCAAATCCAACACATAATTAACATCCCAGAAGAGATTGAGCCTGCATTGTGGCCTGAATGTTGTATCTACAAGGTACCTTCTAGTCTTTTGAAGGTGAAAAAAGTGGCCTACACTCCTCTAATGGTCTCAATTGGCCCTGTGCACCACAAGAAAAAAGAACTAAAGGAAATGCAAGTGGACAAACAAAGATATTTTCACTTCTTCAGGGAACGCCTAGAAAGCGAGCTTAATTTAGTGCAGTACAAATCCTTCCTTGAACAAGAAGAGCCAAAACTACGCAAGTGTTACCAAAAGAAATTCTCTTATATCAGCAAGGAGCAATTTGTGGAGTTGATACTGTTGGATGCTGTATTCATCATGGAGCTGTTTCTAAGAGAAGACAAAAAATGGGAATATAGGGATGACTATCTAATGACTCAAGGATGTGTCAGCAAAAGTATCCAGTGTGACTTGATGCTGCTTGAGAATCAGCTTCCAATGATAGTGTTGGAAAAACTATATGATAAAGTTGTCCCTAGCAGTGTCAAAACGCATACCAGATTTATTAAGCTTGCTCAAAAATACTTTAGATCTTATTATCCTCATCAGAAATCTTCAGAAAACAAGTTTGAGTTACGTAAGTGGGAGAAATCACTACATTTCACTGATCTAATTAGAAATTCCTATCTCCCTAACGAACTGAGAAGCCAGACAGACCATTCTCAAAAGGAGTGTGTGCTAAGGACTGCAACAAAGTTGAATGAGGCTGGGATCAGCTTTGAGAAGGTTAATGATAGATGCTTACTTGACATAAAGTTTAAGAAGAAGCGATTCTTCAGCTGGTTTCTTTGCTTGGGTTGCTTGCCATGCTGCAAGTTGTTCAAAGCCACGTTTCAAATACCCCAATTAAAAGTGGACCACACAACAGAATGTGTTCTTAGGAACCTAGTAGCCTTTGAGCAGTGTCACTATCCTGAGGAGCCTTACATTTGCAACTATGTTTCTCTAATTGACTCTCTTATTCACACCAAAGATGATGCAGAGTTGCTTGTTGAGAAAGAAGCTATTGTCCATGAACTAGGGAGTGATAAGGAGTTAGCAACTTTGGTTAATGGTCTTTGCAAACATGTGGTGACAAATTCAACATGCTACCACCAAATCATGGAAGACGTTAATAATCACTACAACAATGATTGGAAATGGGCTATGGGCACGTTAAGGTGGGTTTACTTTCGTGACCCTTGGAGAACCAGTTCTACTATAGTGGGAGTTGCTGTCCTAATATTCACTATCTTCAACTTTTACCGTGTTATTGATCTACTCTTTAGTTAA 1332 0.3911 MGSSVQHQIQHIINIPEEIEPALWPECCIYKVPSSLLKVKKVAYTPLMVSIGPVHHKKKELKEMQVDKQRYFHFFRERLESELNLVQYKSFLEQEEPKLRKCYQKKFSYISKEQFVELILLDAVFIMELFLREDKKWEYRDDYLMTQGCVSKSIQCDLMLLENQLPMIVLEKLYDKVVPSSVKTHTRFIKLAQKYFRSYYPHQKSSENKFELRKWEKSLHFTDLIRNSYLPNELRSQTDHSQKECVLRTATKLNEAGISFEKVNDRCLLDIKFKKKRFFSWFLCLGCLPCCKLFKATFQIPQLKVDHTTECVLRNLVAFEQCHYPEEPYICNYVSLIDSLIHTKDDAELLVEKEAIVHELGSDKELATLVNGLCKHVVTNSTCYHQIMEDVNNHYNNDWKWAMGTLRWVYFRDPWRTSSTIVGVAVLIFTIFNFYRVIDLLFS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01614 443 Pfam Plant protein of unknown function 29 428 IPR004158 -
Cca01g01614 443 PANTHER DUF247 DOMAIN PROTEIN 6 440 - -
Cca01g01614 443 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 6 440 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01614 Cca-Chr1 36961605 36964617 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01614 - - gmx:100818118 786.178