Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01613 ATGGAGTTTGGCAGCAATTCATGGAAACTTGAAGAGTCACAACTAAACAACAATTCAAAGCAAGACCTTTGTGGTTCTGCCATTGGAAGAACTGAACCCACCATGAAGGAGGAAGTGGAGAGATTTCATAAACTAGGTGTTAAACACGAAGTTGTGAAGACTGTTCTTGAGGCTCAAAACATGATGTTGGAAGCAAAAAGTAGAGATTCAAAAATTGACCAACGTGTTGGTGAACTCATTGAACAACAACAGGATCTTGTTAGCTTCAAAAAAGAATACGGCTCAACTGTGGTTACTTCAATAAACAGAAGGGACAGAGAAATAGAACTTGTGTGGCCTGCTCTTCAACATCCAACACACCATTATGAACACATAGTTGACAGCATCCCAGACCCAGAACAAATTCATGAGCATTCCCTATTGTCTGAATGGTGTATCTACAAGGTGCCTACTACTTTATTGAAGGTGAAAGAGGTTTCCTACACTCCTCAATTGATCTCAATTGGCCCTATGCACCACAACAAACAAGAACTAAAGGAAATGCAAGAGCAGAAACACATATACTATTCTTCCTTTCAGGCACGCCTAGTGAACAAGAATGATTTAATGCACTACACATCCTTCCTTGAACATGAAGAGCAACACTTACGCCGTTGTTACCAAAAGAAATTCTCCAACATCAGCAAGGAGCAATTTGTGCACATGATACGGTTGGATGCAGTGTTCATCATGGAGCTGATTCTGCGAGAAGCAGAAAGGGAGAAACATAAGAATGACTATCTAGTAACTCAAAGATGTGTTAGCAAAAGCATCCAACGTGACTTGATGCTGCTTGAGAATCAGATTCCAATGACAGTGTTGGAAAAACTACATGAATATGATACTGTCCCAAGCAGTGTCAAAAAACCCACCAGATTCATTGAGCTTGCCCATAACTACTTTATATCTTATTATCCTCATCAACAAAAAAGCATGTTTGAGCCATGCAAGTGGGAGAACAAGAACATACTACATTTCACTGACCTAATTAGAAATTCCTATCTCCCTAAGGAACTGAGAAGCCAGGCAAAACATTCTCAAGAGGAGTGTCTGCTAAGGACTGCCACAAAGTTGAATGAGGCTGGGATAAGCTTTGAGAAGGTTCATAATAGATGCTTACTTGACATAAAGTTTGAGAAGAAGAGATTCTTCAGCTGGTTTCTTTGCTTGGGTTGTTTGCCACGTTGCAAGTTGTTCAAAGCAAGGTTTCAAATCCCCCAGTTGAAAGTGGACCACACAACAGAATGTGTTCTTAGGAACCTAATAGCCTTTGAGCAGTGTCACTATCCTGAGGCGCCTTTCATTTGCAACTATGTTTTTCTAATTGACTCTCTTATTCACACCAAAGATGATGCAGAGTTGCTGGTTGAGAAAGAAGCTATTGTACATGAACTAGGGAGTGATCAAGAGTTAACGAATCTGGTTAATGGTCTTTGCAAACATGTAGTGACAGATTCAACATGCTACCACGAAATTATTGAAGATGTTAATGGACACTACAACAACAAGTGGAAGTGGGCAATGGGTACATTAAGGTGGGTTTACTTCCGTGATCCTTGGAGAAGCAGTTCTACTATAGTCGGGGTTGTTGTCCTAGTATTCACTATCTTCAACTTTTACCGTGTTAGTGATATGCTCTTTTag 1683 0.4017 MEFGSNSWKLEESQLNNNSKQDLCGSAIGRTEPTMKEEVERFHKLGVKHEVVKTVLEAQNMMLEAKSRDSKIDQRVGELIEQQQDLVSFKKEYGSTVVTSINRRDREIELVWPALQHPTHHYEHIVDSIPDPEQIHEHSLLSEWCIYKVPTTLLKVKEVSYTPQLISIGPMHHNKQELKEMQEQKHIYYSSFQARLVNKNDLMHYTSFLEHEEQHLRRCYQKKFSNISKEQFVHMIRLDAVFIMELILREAEREKHKNDYLVTQRCVSKSIQRDLMLLENQIPMTVLEKLHEYDTVPSSVKKPTRFIELAHNYFISYYPHQQKSMFEPCKWENKNILHFTDLIRNSYLPKELRSQAKHSQEECLLRTATKLNEAGISFEKVHNRCLLDIKFEKKRFFSWFLCLGCLPRCKLFKARFQIPQLKVDHTTECVLRNLIAFEQCHYPEAPFICNYVFLIDSLIHTKDDAELLVEKEAIVHELGSDQELTNLVNGLCKHVVTDSTCYHEIIEDVNGHYNNKWKWAMGTLRWVYFRDPWRSSSTIVGVVVLVFTIFNFYRVSDMLF 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01613 560 PANTHER DUF247 DOMAIN PROTEIN 115 557 - -
Cca01g01613 560 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 115 557 IPR004158 -
Cca01g01613 560 Pfam Plant protein of unknown function 146 546 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01613 Cca-Chr1 36881019 36884167 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01613 - - ccaj:109788473 1154.04