Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01612 ATGTTTGAGCCATGCAAGTGGGAGAACAAGAACATACTACATTTCACTGACCTAATTAGAAATTCCTATCTCCCTAAGAAACTGAGAATCCAGAGAAAACATTCTCAAGAGGAGTGTCTGCTAAGGACTGCCACAAAGTTGAATGAGGCTGGGATAAGCTTTGAGAAGGTTCATAATAGATGCTTACTTGACATAAAGTTTAAGAAGAAGAGATTCTTCAGCTGGTTTCTTTGCTTGGGTTGCTTGCCACGTTGCAAGTTGTTCAAAGCTAGGTTTCAAATCCCCCAGTTGAGAGTGGACCACACAACAGAATGTGTTCTTAGGAACCTAATAGCCTTTGAGCAGTGTCACTATCCTGAGGCGCCTTACATTTGCAACTATGTTTCTCTAATTGACTCTTTTATTCACACCAAAGATGATGCAGAGTTGCTTGTTGAGAAAGAAGCTATTGTACATGAACTAGGGTGTGATCAAGAGTTAACAAATCTGGTTAATGGTCTTTGCAAACATGTAGTGACAGATTCAACATGCTACCACAAAATTATTGAAGATGTTAATGGACACTACAACAACAAGTGGAAGTGGGCAATGGGTACATTAAGGTGGGTTTACTTCCGTGACCCTTGGAGAAGTAGTTCTACTATAGTCGGGGTTGTTATCCTAGTATTCACTATCTTCAACTTTTACCGTGTTAGTGATATAATATTTTAG 711 0.3938 MFEPCKWENKNILHFTDLIRNSYLPKKLRIQRKHSQEECLLRTATKLNEAGISFEKVHNRCLLDIKFKKKRFFSWFLCLGCLPRCKLFKARFQIPQLRVDHTTECVLRNLIAFEQCHYPEAPYICNYVSLIDSFIHTKDDAELLVEKEAIVHELGCDQELTNLVNGLCKHVVTDSTCYHKIIEDVNGHYNNKWKWAMGTLRWVYFRDPWRSSSTIVGVVILVFTIFNFYRVSDIIF 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01612 236 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 6 233 IPR004158 -
Cca01g01612 236 Pfam Plant protein of unknown function 8 222 IPR004158 -
Cca01g01612 236 PANTHER DUF247 DOMAIN PROTEIN 6 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01612 Cca-Chr1 36867438 36868148 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01612 - - ccaj:109788468 502.671