Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01609 ATGGCGAATGCTAGCAACACTTATGGTTGTTCATTATCTGAAACTGAATTTGAGATGGTGAAACACATCATCGACATTCCCGAGCTAGAAGAGCTATGCCTCTCAGAGTGTTGCATCTACAAGGTTCCTTTCAATCTCCGAAAGGTGAACGAGGATGCCTACACCCCTCAATGGATCTCAATAGGCCCAATTCACCTTTCCAAAGAGGAACTCAAGCCAATGCAAGAGCACAAGAAAAGGTACTTCCACTGCTTCTGGGAGCGAGTCTCAAACGAACAAGACATGAAGAACTACAAGCTCTACCTCGAGACCAAGGAAGAAGCGATTCGGAACTGCTACGCTGAGAAATTCCCTCACATGGCCAAAGAGAAATTCGTGGACATGGTGCTGTTGGATGCTGTGTTCATCATGGAACTCTTGTTGAGAAACTGCAGGTGGAAATCGGAAAGCTCCAAGCACGAGCAAGAGTATAAGCAAACCAAATCGTTTCGTCTGAAACACAGTGATGATCTCATCTTGACGCAGTCGTGGCTCAGCAGGGACATCACTAGGGACTTGATCCTTCTGGAGAATCAAATCCCTTTCTTTGTTCTCCACAAACTCTATGAAGACGTTGTCCCTTGTCAAGACAAGAAGAAAGAGCACACTGCAGGGTTTGTTGATCTTGCCATCGAGTACTTTGCTTTCTATGACACCCAAATGTCTTCTTCTGATGAAACCAAACTTGTTCTCCACAAGAACCAATCCAGGAAAAACTACTTCAGTGGCTCCCTCCGAAGTCCCAAGAAACCTGACAATAAGTCAAAGAACAAAGATAGGTGTAGCAAGAGTACAAGACACTTCACGGATCTGATAAGGTACTTTTACCTTCCCACTGATTTGGGTCGCGACAGTGGTTGTGCCCATCATGTTTTAAGAACTGCAACAAAGTTGCAAGACTCGGGAGTGAGCTTTGAGAAAGATGTGAAGAGAAGGTTACTAGACATAACCTTCGAGAAGAAGCGAATCCTGAGTTCATTTCTTTGCTTTGGTTGCTTGCCATACCTGAACCACTTCAAGGCACGTTTCATAATCCCCCAGTTGAAGGTGGACCACACAACCGAATGCGTGTTGAGGAACCTCATTGCCTTGGAGCAGTGTCACTATCCCGAGAAGCCTTACATCTGCAACTACGTTTCTCTCATCGACTCTCTCATTCACACAACACATGATGTGGAGATGCTGGTTGAGAAGGAAGTGATCGTGCATGAGTTAGGAAGTGATAAGGAAGTGGCCACCCTTGTGAATGCCCTAAGCAAACACGTTGTGACAAACTCAACATGTTACTATGAAACTATAAATGAGCTGAACAAGCATTACCAGAACGCGTGGAACCGCACCATGGCAGCGTTGTGGTTGGTTTACTTCAGAGACCCTTGGAGGGCAAGTTCCACTGTGGTGGGGATTGCTGTGCTCGTTTTCGCTGTGTTCCAATTCCTACGTGCTGTGCGTGCTATCTTCTAG 1503 0.4584 MANASNTYGCSLSETEFEMVKHIIDIPELEELCLSECCIYKVPFNLRKVNEDAYTPQWISIGPIHLSKEELKPMQEHKKRYFHCFWERVSNEQDMKNYKLYLETKEEAIRNCYAEKFPHMAKEKFVDMVLLDAVFIMELLLRNCRWKSESSKHEQEYKQTKSFRLKHSDDLILTQSWLSRDITRDLILLENQIPFFVLHKLYEDVVPCQDKKKEHTAGFVDLAIEYFAFYDTQMSSSDETKLVLHKNQSRKNYFSGSLRSPKKPDNKSKNKDRCSKSTRHFTDLIRYFYLPTDLGRDSGCAHHVLRTATKLQDSGVSFEKDVKRRLLDITFEKKRILSSFLCFGCLPYLNHFKARFIIPQLKVDHTTECVLRNLIALEQCHYPEKPYICNYVSLIDSLIHTTHDVEMLVEKEVIVHELGSDKEVATLVNALSKHVVTNSTCYYETINELNKHYQNAWNRTMAALWLVYFRDPWRASSTVVGIAVLVFAVFQFLRAVRAIF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01609 500 PANTHER DUF247 DOMAIN PROTEIN 5 498 - -
Cca01g01609 500 MobiDBLite consensus disorder prediction 253 275 - -
Cca01g01609 500 Pfam Plant protein of unknown function 39 486 IPR004158 -
Cca01g01609 500 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 5 498 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01609 Cca-Chr1 36783199 36787571 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01609 - - gmx:100306138 852.818