Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01604 ATGGCTCAGGCAATGGCATCGATGGCTGGCTTGCGTGGTTCCTCACAGGCTGTGTTGGAAGGGAGCCTTCAAGTGAGTGGCTCCACACGCTTGAATGTGGGGGGTGGAAGCAGGGTGGCACGTGCGGGGTTCACAGTTAGAGCACAACAACAACAACAAGGGAATAATAATGGTGGTGGTGATGCTCAGAGTAGCCGCAGGACAGTGCTTTCCCTTGTTGCTGCTGGTTTGGCCACTGGCTCTTTTGTTCAAGCTGTGCTTGCTGATGCCAAATCCATCAAAGTTGGACCCCCTCCCCCACCTTCTGGTGGATTGCCTGGAACATTGAACTCAGATGAACCAAGAGACCTTAACCTGCCACTGAAAGATAGGTTCTTCCTTCAACCGTTGACTCCAAGTGCGGCTGCACAAAGGGCAAAGGAATCAGCCAAGGAGATTGTTGCTGTTAAGAAGTTTATAGACAAGAAGGCCTGGCCCTATGTTCAGAATGATCTGCGTCTCAGGGCTGAGTATCTTCGGTTTGATCTCAACACTGTCATTGCTGCAAAGCCTAAGGATGAGAAGAAATCCCTCAAGGAACTCACTGGCAAGCTCTTCCAGGATATCAGCAATCTGGATCATGCAGCAAAAATTAAGAGCAGCCCAGAAGCAGAGAAGTACTATGCTGTTGCTATATCTACTCTGAATGATGTCCTTGCCAAACTTGGTTAA 711 0.4937 MAQAMASMAGLRGSSQAVLEGSLQVSGSTRLNVGGGSRVARAGFTVRAQQQQQGNNNGGGDAQSSRRTVLSLVAAGLATGSFVQAVLADAKSIKVGPPPPPSGGLPGTLNSDEPRDLNLPLKDRFFLQPLTPSAAAQRAKESAKEIVAVKKFIDKKAWPYVQNDLRLRAEYLRFDLNTVIAAKPKDEKKSLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAVAISTLNDVLAKLG 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01604 236 MobiDBLite consensus disorder prediction 93 112 - -
Cca01g01604 236 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 38 236 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Cca01g01604 236 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 5 236 - -
Cca01g01604 236 Gene3D - 89 236 IPR023222 -
Cca01g01604 236 SUPERFAMILY Oxygen-evolving enhancer protein 3, 125 235 IPR023222 -
Cca01g01604 236 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 5 236 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01604 K08901 - gmx:100306034 372.859