Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01595 ATGGGAAATATTTCGAGTTACTTGGGAGGACCAGGAGCTGAGTTATCATCCCAGGGGATGACTTGGATATCAGGAACACTCTATGATCGATTTATTGATAATCAAATCTATGATCCTGAAGCCTTTCACATTGCCATTCTTGATATCTTCAATGCTATCAACATGGCCTTGCCCGGTAAGCATTATGATGCACCAGCACACCAAGAAATAGAGGAGTTTTATGATAAATGGAATGAGGATGGTAAAAAAAAGGAAGATTTCACCAAATTTATAATTGAGAATGTGAATCTCAGCAAAGCAGATGAATCTATGATGATCACTGGGATAGTGGCTCCACCGGTTGCCATGGTAGCTAAGAAAACTGGTCAGTCTGTGCCACAGCTAAGTGCTATTAAAGCCATCCCTGATGCTGTCTTTGTTCCAGCAGCTACAATTGCATTTCTCATTGTTGTGAAGCTCTCCAGAAGAATGGCATTCAAGAATATACCATCCTAG 495 0.4081 MGNISSYLGGPGAELSSQGMTWISGTLYDRFIDNQIYDPEAFHIAILDIFNAINMALPGKHYDAPAHQEIEEFYDKWNEDGKKKEDFTKFIIENVNLSKADESMMITGIVAPPVAMVAKKTGQSVPQLSAIKAIPDAVFVPAATIAFLIVVKLSRRMAFKNIPS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01595 164 PANTHER CALCIUM ION-BINDING PROTEIN 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01595 Cca-Chr1 36011044 36012773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01595 1 150 EF-hand Containing Proteins AT1G64850 28.931 4.04e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01595 - - gmx:100795830 221.09