Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01594 ATGGTTTTCTGGAAGCTTTACGTTGTTGCATTTTCGTCAATTCTGAAACTTTTGTTGGCTACTGCTCTTGGGGCATTCCTTGCACAAGATCGATTGAATATACTCAAAGAAAATGCCAGGAAGCACATCAATGCTATGGTATATTTTGTCTTCACCCCAGCTCTTATTTATAGCAGCATGTCTAATACCATAACCTTAAAGAGCGTGGTTATGCTGTGGTTCATGCCGTTGAGTATTCTTGTAACATATATTGCTGGCACTGTTCTTGGATGGTTACTTATTAAAGCAATTAGAGTTCCTCATCATCTGCATGGCCTTGTGTTGGGGTGTTGTGCTGCAGGAAATCTGGCCAGTTTGCCACTGATTGTAGTTCCAGCTATCTGTAAGGAACAAAATAACCCTTTTGGAGATGAGGCTGTTTGCAATAGAAATGGACTGGCATATGCTTCTCTGTCAATGGCTGTAGGATACACTTATGCTTGGTCTATTACATTCAACATTGTCCGTATATATTCACCAAAGATCTCCAATGCAGTCAAAGTTGATGAATCCACTGTAACTCCAATATCTGCAAAAGGAACTGATCCAGAAAACCTTTTAAAATGCTCTGATGGAGCATTGGTCATGGCTGAGGATATAGCAAAGCCTAATGGTGGCATGGATCAACCTGAAATTGAATGTAAAGTTGTTGATGGGCAAGCCCAGGTACCAGTAAAGCTGAAGATTATGAAAAAGTTGAAAATATTAGCCGACAAAATCAACAACATGAAGATTCTAATTGCACCTTCGACGATAGCAGTGATTGTTGGTTTGACAATTGGTGTTGTCCCTCAATTTCGAAAACTACTAGTTGGTGACACTGCTCTTCTCCATGTGGTTCAAGACTCTGTAACCATGCTGGGGGATGCAAGTGTTCCAGCAATGGTCTTATTGCTTGGGGCAAATCTTGTTACAGGTTTAAAAGGATTTGGAAAGCAACTTCCACTTATTGTTGGCATTATTGTGGTTAAATTTATTGCCATGCCAGCAATAGGTATAGCCATTGTCAAAGGTGCAGTTTATTTCAACTTGATCCACCATGATCCACTGTATCAGTTTGTTTTACTCCTTCAATTTGCTCTCCCACCTGCGATAGTCATGAGTACAATTACTCAAATGTTTGGAACTGGTGAGAGTGAATGCTCATCTATCATGTTGGGAACTTATTCATGTGCTACAGTTTTGCTTACTCTCTGGTGCACAGTGTTTATGTGGCTTGTAATATAA 1266 0.4005 MVFWKLYVVAFSSILKLLLATALGAFLAQDRLNILKENARKHINAMVYFVFTPALIYSSMSNTITLKSVVMLWFMPLSILVTYIAGTVLGWLLIKAIRVPHHLHGLVLGCCAAGNLASLPLIVVPAICKEQNNPFGDEAVCNRNGLAYASLSMAVGYTYAWSITFNIVRIYSPKISNAVKVDESTVTPISAKGTDPENLLKCSDGALVMAEDIAKPNGGMDQPEIECKVVDGQAQVPVKLKIMKKLKILADKINNMKILIAPSTIAVIVGLTIGVVPQFRKLLVGDTALLHVVQDSVTMLGDASVPAMVLLLGANLVTGLKGFGKQLPLIVGIIVVKFIAMPAIGIAIVKGAVYFNLIHHDPLYQFVLLLQFALPPAIVMSTITQMFGTGESECSSIMLGTYSCATVLLTLWCTVFMWLVI 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01594 421 PANTHER EFFLUX CARRIER FAMILY PROTEIN, PUTATIVE-RELATED 1 420 - -
Cca01g01594 421 PANTHER - 1 420 IPR045033 GO:0080162
Cca01g01594 421 Pfam Membrane transport protein 11 412 IPR004776 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01594 Cca-Chr1 36002027 36008598 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01594 K24139 - gmx:100807081 610.142