Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01571 ATGGCTAAAGCAATTGCAGCTTCTTTCTTGGTTCTGCTTCTGGCTTTCCCCACTGTGTTTGGAACTGACCATGATGTAGGTGAAAGTGCTGGATGGGCCCTTGGGACTAACTATGCCACCTGGGCCTCTGGAAAAACTTTCAGGGTTGGTGACAATTTGGTGTTCAAGTATGACTCAACCCATGAGGTTGATGAAGTTGATGAGAGTAGCTACAACAGCTGCAGTTCAAGCAACAGCATCAAGAACTACAAGGGTGGTAACACCAAAATTGAACTCTCTTCAACAGGCAAAAGGTACTTCCTGTGTCCCACAGCAGGCCACTGTGCAGGAGGCATGAAACTAGAAATCAATGTAGTGGCTGCTGCTAGTGGCACCCCTCCAACCACCCCAAGTGGTACCCCCCCATCAAAATCCCCTTCTCCTCCCTCTGAGTCAGGATCCCCTGCAACCAACTCCACTTCACCACCTTCTCCAAAGTCTAGTGGAGCAGTTTCTGTGTCCAGTGGCATTGCTCTTTTGGTGGGGTCAGCAATTGTCTTTGCCTTCATGGCTTAA 555 0.4919 MAKAIAASFLVLLLAFPTVFGTDHDVGESAGWALGTNYATWASGKTFRVGDNLVFKYDSTHEVDEVDESSYNSCSSSNSIKNYKGGNTKIELSSTGKRYFLCPTAGHCAGGMKLEINVVAAASGTPPTTPSGTPPSKSPSPPSESGSPATNSTSPPSPKSSGAVSVSSGIALLVGSAIVFAFMA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01571 184 CDD Phytocyanin 22 118 - -
Cca01g01571 184 PANTHER CUPREDOXIN SUPERFAMILY PROTEIN-RELATED 6 137 - -
Cca01g01571 184 MobiDBLite consensus disorder prediction 123 164 - -
Cca01g01571 184 Gene3D - 22 130 IPR008972 -
Cca01g01571 184 PANTHER BLUE COPPER PROTEIN 6 137 IPR039391 GO:0009055
Cca01g01571 184 MobiDBLite consensus disorder prediction 128 142 - -
Cca01g01571 184 MobiDBLite consensus disorder prediction 143 164 - -
Cca01g01571 184 Pfam Plastocyanin-like domain 33 112 IPR003245 GO:0009055
Cca01g01571 184 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
Cca01g01571 184 SUPERFAMILY Cupredoxins 21 119 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01571 Cca-Chr1 35037095 35038756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01571 21 141 Miscellaneous Gene Families AT2G32300 43.902 2.39e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01571 - - gmx:100803164 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01571 01 35037095 35038756 Cca01g01571 01 35037095 35038756 ECH