Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01563 ATGGCGAGCGAAGAGGAGAACGGGGAATTCTACCTGCGTTACTACGTTGGCCACAAGGGGAAGTTCGGGCACGAGTTCCTAGAGTTCGAGTTCAGACCAGACGGAAAACTCCGTTACGCCAACAACTCCAACTACAAAAACGACACCATCATCCGCAAGGAGGTTTACCTTACCCCTGCCGTTCTCCGCGAGTGCCGCCGTATCATCGCCGAGAGCGAGATTATGAAGGAAGATGATAACAACTGGCCAGAACCTGATAGAGTGGGGAGGCAGGAGCTGGAGATTGTAATGGGGAACGAGCACATATCCTTCACCACCTCCAAGATTGGCTCTCTTGTTGATGTTCAGAGTAGCGCTGATCCTGAAGGGCTTCGGATCTTTTACTATCTTGTTCAGGATTTGAAAGCACGAGGAACAAATGGCCCAGGCATAAGTATAACCTCTACGAAAGATGCTAGCACTAGAACTGCTTCTGCAGAGAGGCTCTGGGAACCTTTACCTTCCAAAGGAAGAAAGGAGCTTATCAGCCTTGTGCAGGATTCTATGCAATGTGCAAACAACAGTTCAACGATAGGTCCTTTCTCTCAAAGGAAAAGGGTCACTGCCCCATCAGGCAAGGTAGATGGAAAATTTTTTTATACTACCCCGATGCCTCTGCATTCATCTACTGTCTCTGGGGGGTTATTGAGAAGCAAAGGAGATGGAAAACAGAAAAAAGAAGGTTCATGCGTTGGAACCAAAGGATTCTGTGCCCCAGATAATATCTTCTGGAGTCACCCTACTCCACATGGTGATTGGGAAGACTCCTTTCACCGGAATATAAAAGAAATTGTTAAATTCCGGGGCAGTGAAGAGTTTTGGGAAGTGGCCAAGCTACATGACCGTGAATTATCTTATACTGCAGAGTTACTTGATGAGCGTTACTTACAGTCATGGGACTTTGAAAGCTGGTGCAAGATTCACGCAAAGAGGCCAGAGTTTCTTGAGCAGATCCCGAAATCGTTTTTTGATTTGATAGACAAGTCTCTAAAATTTCATCAAGTGAAGGAAGCAATACATGAAAAAACACCATACATAGCTAGATGTGTTCAAATCCCACGGTTGGAGGACTACCACCTTCTCTTCACCTCAGATTTCCATCTCACCTCTTTAAGCTTTCCATCCAACCCATAG 1173 0.4604 MASEEENGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYLTPAVLRECRRIIAESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSADPEGLRIFYYLVQDLKARGTNGPGISITSTKDASTRTASAERLWEPLPSKGRKELISLVQDSMQCANNSSTIGPFSQRKRVTAPSGKVDGKFFYTTPMPLHSSTVSGGLLRSKGDGKQKKEGSCVGTKGFCAPDNIFWSHPTPHGDWEDSFHRNIKEIVKFRGSEEFWEVAKLHDRELSYTAELLDERYLQSWDFESWCKIHAKRPEFLEQIPKSFFDLIDKSLKFHQVKEAIHEKTPYIARCVQIPRLEDYHLLFTSDFHLTSLSFPSNP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01563 390 CDD Mago_nashi 9 136 IPR004023 GO:0008380|GO:0035145
Cca01g01563 390 SUPERFAMILY Mago nashi protein 9 136 IPR036605 GO:0005634
Cca01g01563 390 Gene3D Mago nashi 7 139 IPR036605 GO:0005634
Cca01g01563 390 Pfam Mago nashi protein 10 136 IPR004023 GO:0008380|GO:0035145
Cca01g01563 390 PANTHER PROTEIN MAGO NASHI HOMOLOG 6 136 IPR004023 GO:0008380|GO:0035145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01563 Cca-Chr1 34615852 34620696 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01563 K12877 K02214 gmx:100783107 292.352