Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01538 ATGGCTGCAACCAGGGCTCGAGTTAGTAGCTTCTCTCGCAATGTATCAACTGCAACATCTCAGAATCCTGGACTTAAGCATGGCCCTAATGGGACTATGTTCATTTCATCTGGGATTCCAGATTTGGACAAGATCTTAGGTGGTGGATTTTCTCTGGGTAGCCTTGTCATGGTTATGGAAGATGCAGAAGCACCACATCATATGCTTATATTGAGAAATTTTATGTCTCAAGGGCTTGTGCAAAAACAGCCACTCTTGTATGCTAGTGCATCTAGAGAGCCTAAAAGATTTCTTGGTACTTTGCCTAGTCCAGCGTCACTCAAAGGAGATAAATCTTCAGATCTTAGCCATGAAAAAGATCTAAGAATTGCTTGGCAATACAAGAAGTACTTTGGTGAGCCTCAGCTAAATCTCAACACTAATAATGGTGGTCAGCATGATTATTGTAATGATTTTGACTTGAGAAAGCCACTGGACCGGCAATTTTTTAGTGGCAGCAATGTAGATTGTGTTAGCATCAACGATTCTCCAAACCTTACTGCTCTTCAAGATCACTGTGCTGGATTTCTAGCTAAATTCTCAAGAAATGAAGGCAGCATTCCCTCTGCTGGTCGTATTGCAATTCAATCATTCTGTTCTCCACAATGCAAGTATTCAAATGAGGAGTGGCATATGCTTTCCTTTATTAGGTCCCTAAAGGGCATGGTCCGGTCTTCAAACGCTGTTGTTGTTGTAACCTTTCCACCTTCACTTCTTTCTCCATCTTGCTCAAAAAGATTGCAGCATATGGCAGACACCTTGCTTTCTGTCAAAGCCATTCCAGATGAAGACAAGGAACTGGCAAAACTCCTCACTGGTTACCAGGATATGATTGGGCTTTTAAATGTACACAAAGTTGCACGGTTAAATACACAGGTTCCTGTGATTCTGGAGGCCACAACATTCTCACTAAAATTACACAAACGGAGGTTTTTGGTTTTAGAATGTCTAAATCAAGCCCCAGTTGACGGTTCAAGTGGGAGCTCATATGGCACATCTGGTGGTTGTTCTGGGTCAACTAAAACTGGACCACTTGATTTTTAG 1083 0.4192 MAATRARVSSFSRNVSTATSQNPGLKHGPNGTMFISSGIPDLDKILGGGFSLGSLVMVMEDAEAPHHMLILRNFMSQGLVQKQPLLYASASREPKRFLGTLPSPASLKGDKSSDLSHEKDLRIAWQYKKYFGEPQLNLNTNNGGQHDYCNDFDLRKPLDRQFFSGSNVDCVSINDSPNLTALQDHCAGFLAKFSRNEGSIPSAGRIAIQSFCSPQCKYSNEEWHMLSFIRSLKGMVRSSNAVVVVTFPPSLLSPSCSKRLQHMADTLLSVKAIPDEDKELAKLLTGYQDMIGLLNVHKVARLNTQVPVILEATTFSLKLHKRRFLVLECLNQAPVDGSSGSSYGTSGGCSGSTKTGPLDF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01538 360 PANTHER PAX6 NEIGHBOR PROTEIN PAXNEB 1 360 IPR008728 GO:0002098|GO:0033588
Cca01g01538 360 MobiDBLite consensus disorder prediction 337 353 - -
Cca01g01538 360 Pfam PAXNEB protein 19 360 IPR008728 GO:0002098|GO:0033588
Cca01g01538 360 Gene3D - 17 336 IPR027417 -
Cca01g01538 360 MobiDBLite consensus disorder prediction 1 32 - -
Cca01g01538 360 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 272 IPR027417 -
Cca01g01538 360 MobiDBLite consensus disorder prediction 1 27 - -
Cca01g01538 360 MobiDBLite consensus disorder prediction 337 360 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01538 K11375 - gmx:100799237 663.299