Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01530 ATGGCAGAGGGGGAGAGTCCAAGTGTGATGCCAAAAGTGATCACTTTCCTCTCCTCTCTACTTGAGAGAGTAGCTGAGTCAAATGATCACAACCAAGAACAGCATCAGCAGAAGATCTCAGTGTTCCATGGCTTGACACGACCCAACATCTCAATTCATAGCTACCTTGAGAGAATCTTCAAGTACGCTAATTGCAGCCCCTCATGCTTCATTGTTGCCTATGTCTACCTCGACCGTTTCACTCACAAACAACCCTCCTTTCCCATCAACTCATTCAATGTGCATCGCTTGTTGATCACAAGCGTCATGGTTGCTGCCAAATTCATGGACGACATGTACTACAACAATGCTTACTATGCAAAAGTTGGAGGAATCACCAAAATAGAGATGAATTTTCTTGAGTTGGATTTCTTGTTTGGTCTGGGATTCCATTTAAATGTAACCCCAGGAACCTTCCAAGCCTACTATGTCCATCTCCAAAGAGAAATGCTGCTGATGCAACCTATAAATTTTGCAGATTCAACCCTAACTTTAGGAAAATCACTAAAGGCCCACTTGTGCTTCAATGAGGATGAATCTTCTCATCAAAAGCAACAACAACAACTAGCTGTTTGA 615 0.426 MAEGESPSVMPKVITFLSSLLERVAESNDHNQEQHQQKISVFHGLTRPNISIHSYLERIFKYANCSPSCFIVAYVYLDRFTHKQPSFPINSFNVHRLLITSVMVAAKFMDDMYYNNAYYAKVGGITKIEMNFLELDFLFGLGFHLNVTPGTFQAYYVHLQREMLLMQPINFADSTLTLGKSLKAHLCFNEDESSHQKQQQQLAV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01530 204 Pfam Cyclin 23 145 IPR013922 GO:0000079|GO:0019901
Cca01g01530 204 PANTHER CYCLIN 1 201 - -
Cca01g01530 204 SUPERFAMILY Cyclin-like 52 146 IPR036915 -
Cca01g01530 204 PIRSF PREG 1 204 IPR012389 -
Cca01g01530 204 PANTHER UNCHARACTERIZED 1 201 IPR013922 GO:0000079|GO:0019901
Cca01g01530 204 Gene3D - 7 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01530 Cca-Chr1 33465176 33467785 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01530 - - gmx:100794854 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01530 01 33465176 33467785 Cca01g01530 01 33465176 33467785 ECH