Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01528 ATGTTTAATCCTAAACAAAAATTTGGCAGTTTTGCAATCGCAGCAACATCACTCTTCGCTGGGGTTATTTTGTTGTACCACTACTGCTCCTCTTTTTCCTCCAATGAAATAGCCTTATTCCAGAAAGAACAACTCTGCAAAAAAACAAATTTTAATACCACCAACATTGAAGCATATGGAGATGCCCTTGATTCTAGTTTGGCTAAAGCCTCAATGAGAAACAAAACAGTGATAATTGTTGTAGTAAACAAGGCCTATGTAGATCAAGATGTAGAGAGTGATAGCACTATGCTTGATTTTTTTCTTGGTAATCTTTGGCTTGGAGAGGGAACAAGGTCTCTTGTTAATCACCTTTTGATAGGAGCAGTTGATCAAACAGCCTATGATCGGTGTCAATTTCTGAAGTTGAATTGCTTCAAATTGGAAATAGATGGAGTTGATTTTGAAGGTGAGAAAATCTACATGTCTCAAGATTATATCAAAATGACGTGGATAAAGATTCAATTTGTGTTGAAAGTTCTCAAACGTGGCTACAACGTTGTTTTCACGGACACTGATATAATGTGGTTAAGAAACCCATTTATTAGGTTAAGCAAGAATGAGACAGAAGATCTCCAAATTAGTACAGATAGATATCTTGGTGATCCTTGGTCAAAAAGTCCAATCAACACTGGATTTTACTTTGTGAGGTCAAATAACAAGACTATTTCCCTATTTGAAACATGGTATGATCAAAAGGATAATGTCACAGGAAAAAATGATCAAGATGTGCTTTTGGACCTCTTTGTAAATGGTATAATCAAAGATTTGAGGCTTAGAGTTAGGTATTTGGATACCCTTTATTTTAGTGGATTTTGTGAAGATAGCAAAGATTTTAGGGAAGTCATCACCGTCCATGCCAACTGTTGTAGAAGCATCACTGCAAAAATGGCTGATATGAAGATGGTTCTTCAAGATTGGAAGCGATTTAGGAGGTTGGGGGTTAATTCTACTGTGAATCCCCAATGGACTAAGCACAATTGGTGTAATCAATCTTGGAGAAACCTCTAA 1050 0.3638 MFNPKQKFGSFAIAATSLFAGVILLYHYCSSFSSNEIALFQKEQLCKKTNFNTTNIEAYGDALDSSLAKASMRNKTVIIVVVNKAYVDQDVESDSTMLDFFLGNLWLGEGTRSLVNHLLIGAVDQTAYDRCQFLKLNCFKLEIDGVDFEGEKIYMSQDYIKMTWIKIQFVLKVLKRGYNVVFTDTDIMWLRNPFIRLSKNETEDLQISTDRYLGDPWSKSPINTGFYFVRSNNKTISLFETWYDQKDNVTGKNDQDVLLDLFVNGIIKDLRLRVRYLDTLYFSGFCEDSKDFREVITVHANCCRSITAKMADMKMVLQDWKRFRRLGVNSTVNPQWTKHNWCNQSWRNL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01528 349 PANTHER - 3 347 - -
Cca01g01528 349 Pfam Nucleotide-diphospho-sugar transferase 114 313 IPR005069 -
Cca01g01528 349 PANTHER EXPRESSED PROTEIN-RELATED 3 347 IPR044821 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01528 Cca-Chr1 33369724 33372021 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01528 - - gmx:100777401 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01528 01 33369724 33372021 Cca01g01528 01 33369724 33372021 ECH