Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01527 ATGATCATGGATAACCCTAAACACATATTTTGGAGTCTGGCAACGGTGACGTTACTCTTCCTTGGAGTTATTTTGATGTATCATTGGTCCTCCTCTTTCTCCAATGAATTAGTCCTAACCAAGAAAGAACTTTTCTGCAAGCAATCAAATTTTACCACCACCACCAATACAGAAGCAATTGGAGATGCCCTTGATTCTGCTTTAGCCAAAGCTTCAATGGGAAACAAAACGGTGATAATAACTATAGTAAATAAGGCATACGTAGAGCAAGATGTAGAGAGTGATAAAACTATGTTCGATATATTTCTTGATAGTTTTTGGCTTGGAGAGGGAACAAGGTCTCTCATTAATCACCTTCTCATAGTAGCGGTTGATCAAACAGCCTATGATCGATGTCAATTTCTAAAGTTGAATTGCTTCAGATTGGTAACAGATGGAGTTGATTTTGAAGGTGAGAAAATCTACATGTCTCAAGACTTCATCAAAATGATGTGGAGAAGGACTTTCTTCCTCTTGGAAGTTCTCAAACGTGGCTACAATTTCATTTTCACGGACACAGATGTAATATGGCTAAGAAATCCATTTATAAGATTAAGTAAGAATAAGGCAGAAGACCTCCAAATTAGCACAGATACATACCTTGGTGGCCCTTGGTCAAAAAAGAATCCAGTAAATACTGGATTTTATTTTGTGAGGTCAAACAACAAGACCATTTCCCTATTTGAAACATGGTATGACCAAAAGGACAATGCCACAGGAAAAAAGGAGCAAGATGTGCTTATTGATCTCATTAGAGGTGGTATAATTGAACATTTGAAACTAAGGGTTAGGTTCTTGGACACTCTTTATTTTAGTGGATTTTGTCAAGATAGTAAAGATTTTAGGGCAGTTACTACTATACATGCCAACTGTTGTAGGAGCATCACTGCAAAGGTGGCAGATATCAAGGCAGTCCTTCGCGATTGGAAGATATATAAGAGATTGGATGCTAATTCTACTATAAATCTCCAATGGACTAAGCACAATTGGTGTTGGCAATCTTGGAGAACACCTATAAAAGTAAAAACCTAA 1071 0.3725 MIMDNPKHIFWSLATVTLLFLGVILMYHWSSSFSNELVLTKKELFCKQSNFTTTTNTEAIGDALDSALAKASMGNKTVIITIVNKAYVEQDVESDKTMFDIFLDSFWLGEGTRSLINHLLIVAVDQTAYDRCQFLKLNCFRLVTDGVDFEGEKIYMSQDFIKMMWRRTFFLLEVLKRGYNFIFTDTDVIWLRNPFIRLSKNKAEDLQISTDTYLGGPWSKKNPVNTGFYFVRSNNKTISLFETWYDQKDNATGKKEQDVLIDLIRGGIIEHLKLRVRFLDTLYFSGFCQDSKDFRAVTTIHANCCRSITAKVADIKAVLRDWKIYKRLDANSTINLQWTKHNWCWQSWRTPIKVKT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01527 356 Pfam Nucleotide-diphospho-sugar transferase 115 313 IPR005069 -
Cca01g01527 356 PANTHER - 3 355 - -
Cca01g01527 356 PANTHER EXPRESSED PROTEIN-RELATED 3 355 IPR044821 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01527 Cca-Chr1 33279636 33283098 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01527 - - gmx:100777401 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01527 01 33279636 33283098 Cca01g01527 01 33279636 33283098 ECH