Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01524 ATGGATAATCCTAAACAAACACTTGGGAGTTTGGCAACGGTAGCATTACTCTTCGTTGGGGTTATTTTTTTTTACCACTTGTCCTCCTCTTTGTTCAACGAATACGTCCAAAACCGAAATGGATCATTCTGCAATCAATCAAATATTACCACCAACATTGAAGAATATGGAGATGACCTTGACTTTGCTTTGGCCAAAGCCTCGATGGGAAACAAAACGGTGATAATAGCTATAGTAAATAAGGCATATGCAGAGCAAGATGTAGAGAGTTATACGACAATGCTTGATATATTTCTTAGTAGTTTTTGGCTTGGAGAGGGAACAAGGTCTCTCATTAATCACCTTCTCATAGTAGCGGTTGATCGAACGTCTTATGATCGGTGTCAGTTTTTAAGGTTGAATTGCTACAGATTGGAAACAGATGGAGTTGAATTTGAAGGTGAGAAAATCTACATGTCTCAAGATTTCATCAAGATGATGTGGAGAAGGACTCAATTCCTCTTGGAAGTTCTCAAACGTGGCTACAACTTTGTTTTCACGGATACTGATGTAATGTGGTTAAGGAATCCATTTACAAGGTTAAGCAAAAGCGAGACAGAAGATCTTCAAATCAGCACTGACATTTACCTTGGTGATCCATGGTCAGAAAAACATCTAATCAATACTGGATTTTACTTTGTGAGATCAAACAACAAGACCATATCCCTATTTGAAACATGGTATGGCCAAAAGGACAATGCCATAGGAAAAAAAGAGCAAGATGTGCTTCTTGACCTCTTTAGAAGTGGTATAATTGGAGAGTTGGGAATTAGGGTTAGGAGCATTACTGCGAAGGTGACAGATTTAAAGGCAGTTCTTCGTGATTGGAAGCAATTTAAGAGGTTAGAGCCTAACTCCATAATAAATCCCCAGTGGACTGAACATTTTTGGTGTTTGCAATCTTGGGGAAGAACTGGCAAAATAAAAGGCCAAGATTAG 978 0.3865 MDNPKQTLGSLATVALLFVGVIFFYHLSSSLFNEYVQNRNGSFCNQSNITTNIEEYGDDLDFALAKASMGNKTVIIAIVNKAYAEQDVESYTTMLDIFLSSFWLGEGTRSLINHLLIVAVDRTSYDRCQFLRLNCYRLETDGVEFEGEKIYMSQDFIKMMWRRTQFLLEVLKRGYNFVFTDTDVMWLRNPFTRLSKSETEDLQISTDIYLGDPWSEKHLINTGFYFVRSNNKTISLFETWYGQKDNAIGKKEQDVLLDLFRSGIIGELGIRVRSITAKVTDLKAVLRDWKQFKRLEPNSIINPQWTEHFWCLQSWGRTGKIKGQD 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01524 325 PANTHER EXPRESSED PROTEIN-RELATED 1 273 IPR044821 -
Cca01g01524 325 PANTHER - 1 273 - -
Cca01g01524 325 PANTHER - 273 323 - -
Cca01g01524 325 Pfam Nucleotide-diphospho-sugar transferase 111 294 IPR005069 -
Cca01g01524 325 PANTHER EXPRESSED PROTEIN-RELATED 273 323 IPR044821 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01524 Cca-Chr1 33041409 33050762 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01524 - - gmx:100777401 515.383