Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01459 ATGAGGTGTAAGAAACACTTACAGGATTTAACCAGCACCATCGGCGTCTGCGCTTCCTGCCTCCGCGAACGCCTCCAACCCCTCCTCGCGGCCCAGGCCAAGGCCCAAGCCCAAAACGACGCCGATTATCACCGTTTCAGGAagcacaagcacaagccgcaacccgagcccgagcccgagcccgaaccgagtccTCCGCCGATCAATTTCCCTCACTCGGTGTCGCCGTACGTCGCTCGCCGGAAACACGAGCGGATGTTCCACGGCACGCCGCAGGTCTTCGCCGCCGCGTACGACGGCGTAACGCCGGCGTCGACGAGGAGGAGGTCCGCCGGACGATTCGGGATCCTCTCGAGCCTCTTCCGTGGCAGATCGAACAAAACGGAAACCGCGCCTTGCGAGGAACCGTCCTCGTCGGCGTCTCCACCGTCGTGGTTCTCGGCGATGCTCCACGCGCGCCGCCACCACCACGGCGGAGCAGAAAGTCGGCGGTGCCGACAAACGGATCGAGGATTATCTCCGGCGCCGGATAATTTCACCGAAGAAGCAAAGGATCGGACGGATTCGGGATTCTCAGCGGAATCCTCGCCGTGGAAGCAGAATCCTTCGCCGGCGCCGGCACCGTCGAATCGGCGGTCGCGGCTTAACCCCGGCGGCGGGAAGGGAATTTCGACGATGGCGTTTTGTCTGAGTCCGTTGGTGCGAGCGAGTCCGAACCGGCATTGGAACCATAAGGGGTTGGCGCAGGAAATGGGTGTGGGGGCTGGTGGGGCCCACCATATATCCTCTGCGGCGTCGTATTGCGCTAACAGCTCGCGGAAGCTTGCGGATTGCGGAAGAGCCGCGCACAACCGTTGA 858 0.5886 MRCKKHLQDLTSTIGVCASCLRERLQPLLAAQAKAQAQNDADYHRFRKHKHKPQPEPEPEPEPSPPPINFPHSVSPYVARRKHERMFHGTPQVFAAAYDGVTPASTRRRSAGRFGILSSLFRGRSNKTETAPCEEPSSSASPPSWFSAMLHARRHHHGGAESRRCRQTDRGLSPAPDNFTEEAKDRTDSGFSAESSPWKQNPSPAPAPSNRRSRLNPGGGKGISTMAFCLSPLVRASPNRHWNHKGLAQEMGVGAGGAHHISSAASYCANSSRKLADCGRAAHNR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01459 285 MobiDBLite consensus disorder prediction 32 74 - -
Cca01g01459 285 MobiDBLite consensus disorder prediction 125 145 - -
Cca01g01459 285 MobiDBLite consensus disorder prediction 125 220 - -
Cca01g01459 285 MobiDBLite consensus disorder prediction 190 210 - -
Cca01g01459 285 PANTHER EXPRESSED PROTEIN 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01459 Cca-Chr1 30490206 30491377 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01459 - - gmx:102667616 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01459 01 30490206 30491377 Cca01g01459 01 30490206 30491377 ECH
Cca01g01459 01 30490206 30491377 Cca07g02030 07 47822183 47823679 PCT