Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01458 ATGTTGAACGAAGGTGGCCAGATAGGTTTTCTACCTAGGCTAGGGTTCGCTTGGCGGAATGGTCATATTGGCCACTGCAACCAGGGAAACAACATGTACCTCTTTCCAGGCATTGGTCTCGGAACCCTTCTGTCAGGCGCTAGGATTGTCTCTGATGGCATGCTACAGGCTGCAGCTGAGCGTCTGGCTACATATATGAGTGAAGAGGAGGTCCTCAAAGGGATTATTTTCCCTTCAACATCCAGAATTCGAGATATTACAAAGGAGGTAGCTGCAGCTGTTATAAAAGAAGCTGTGGAGGAGGACCTAGCTGAAGGATATCATGGAATGGATGCTCGGGAGTTGAAGAAACTTAGTGAGGATGAAATCAGGGAACATGTGAAGAATAACATGTGGAGTCCAGAGTACCCTACATTAGTTTACAAGAAAGAATGA 435 0.4621 MLNEGGQIGFLPRLGFAWRNGHIGHCNQGNNMYLFPGIGLGTLLSGARIVSDGMLQAAAERLATYMSEEEVLKGIIFPSTSRIRDITKEVAAAVIKEAVEEDLAEGYHGMDARELKKLSEDEIREHVKNNMWSPEYPTLVYKKE 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01458 144 Gene3D - 11 144 - -
Cca01g01458 144 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 141 IPR036291 -
Cca01g01458 144 PANTHER MALIC ENZYME 20 140 - -
Cca01g01458 144 Pfam Malic enzyme, NAD binding domain 20 99 IPR012302 GO:0051287
Cca01g01458 144 SMART Malic_M_2 1 99 IPR012302 GO:0051287
Cca01g01458 144 PANTHER MALIC ENZYME-RELATED 20 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01458 Cca-Chr1 30436578 30446549 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01458 K00028 - gmx:100799344 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01458 01 30436578 30446549 Cca01g01458 01 30436578 30446549 ECH