Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01455 ATGGGAACCGTTGAAGCTGCGAAAAAGGATGCAAATGGAAGCATCCTAGTGAAAAATCCTACAGTTGTTTTTGTATTAGGTGGCCCAGGCAGTGGAAAGGGTACTCAATGTGCAAATATTGTCCAAAATTTTGGGTATACTCACCTCAGTGCTGGTGATCTTCTGCGAGCAGAAATCAAATCTGGTTCTGAAAATGGTACAATGATACAGAATATGATTAAGGAAGGAAAAATTGTTCCCTCTGAGGTAACAATTAAGCTCTTACAAAGAGCAATGGAGGAAATTGGCAACGACAAATTTCTTATTGATGGTTTTCCTCGCAATGAGGAAAACCGTGCAGCATTTGAGAAAGTGACAGGAATAGAGCCAACATTTGTCCTATTTTTTGATTGCCCTGAGGAAGAGATGGAGAGGCGACTGCTTAGTAGGAATCAGGGTAGAGAAGATGACAATATTGAAACAATAAGGAAGCGGTTTAAGGTTTTCTTGGAGTCGAGTCTCCCTGTGATTAATTATTATGATGCCAAGGGAAAAGTTCGCAAGATTGATGCTGCAAGGCCAATTGAAGAGGTATTTGAGTCCGTCAAAGGAATTTTTGCTCCAAAGAATGAGAAGGTAAATTACTATGTTCGCCTTATGTCAAAACTTTATATGTACAAGTTCCATTATGTATCAAAGACAAAAATTGGAAATCACTGTCTTCATTGTTAA 711 0.3882 MGTVEAAKKDANGSILVKNPTVVFVLGGPGSGKGTQCANIVQNFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQRAMEEIGNDKFLIDGFPRNEENRAAFEKVTGIEPTFVLFFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLESSLPVINYYDAKGKVRKIDAARPIEEVFESVKGIFAPKNEKVNYYVRLMSKLYMYKFHYVSKTKIGNHCLHC 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01455 236 Gene3D - 9 199 IPR027417 -
Cca01g01455 236 PANTHER NUCLEOTIDE KINASE 3 206 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca01g01455 236 Hamap Adenylate kinase [adk]. 21 200 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca01g01455 236 Hamap UMP-CMP kinase [CMPK1]. 20 202 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Cca01g01455 236 CDD ADK 22 191 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca01g01455 236 Pfam Adenylate kinase 25 177 - -
Cca01g01455 236 ProSitePatterns Adenylate kinase signature. 100 111 IPR033690 -
Cca01g01455 236 PANTHER UMP-CMP KINASE 3 206 - -
Cca01g01455 236 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 22 199 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Cca01g01455 236 PRINTS Adenylate kinase signature 24 37 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca01g01455 236 PRINTS Adenylate kinase signature 52 66 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca01g01455 236 PRINTS Adenylate kinase signature 164 178 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca01g01455 236 PRINTS Adenylate kinase signature 147 162 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca01g01455 236 PRINTS Adenylate kinase signature 100 116 IPR000850 GO:0005524|GO:0006139|GO:0019205
Cca01g01455 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 199 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01455 Cca-Chr1 30332536 30337308 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01455 K13800 - gmx:100500111 390.578