Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01454 ATGCTACCGAGTAGATTCTCGTTTTTCGGAGGTGGGGATTCGCACGTGTCCAATTCAGCGCCAAAGGGTGAAGAACTGTCTCCCCCCACTCTGAAGCTCGAAACGGATAAACTGGTTTACAGGCCCGGTGATCCTGTTGTCGTCACCATCCAGATCTCTAATCCCTCAAGTGGGTACTCGTTTTTGATGGAAAGACTCAGTTTTGAGATCAAGGGCATTGAGAAATTGGACACTCAGTGGTTTGCCACACAGAAGCCTTTGCCTGGCTCGAAACAAAGGAGAGGTGAGCATGCTTTTCTGGAGTGCTCTACACCAGTCCTAGTCGCAAACCAGATCGTTAATGCTGGCGCCAGCAAATCATATGTGGTTCGAATGCTACTGCCTAGCATCATCCCACCATCGTACAAGGGTTCAAACATTCGCTATTTGTACTATGTTAAAAGCGCATTTACTGGAGGGTGGATAATATTTGAAAATGGGCAATCTCGTGCAGAGTCCAAAAATGATGTTACTGATGTGGAAGTTCGTATTCCATTACAGATATGGATAAACCAGAAAAGTATTACAATGGATGATGATATTGTTCCATTAACTGCTGTACAACTGGATATATTTTGGAAAGAGATGGATGGAGATGCTGATTGGGTTAGAGCTAATGATATGTATGATGGAGTTGAGGAGGGCTATGACAGCTCAAGAGATGATATATCATCTGTTTCTTCTTATAACCCCATGAGAGAGAATCTACACAGAGGCTTCGGAAGTTCACTATCATTGCGATCTTCTTCTGCAAGATCATTGACCAGGGATGCCTCTACTTTAGAAGGTTTCCGAACAAGTTTATCTTCAAATATGGCTCTTCCTCGGCTGTCTGTTGCTGAAGTATTATCTGATTCAGGTGCTGATGTCTTGTCAAGCCAGAAGTCATTTGCTGTTGTCTCCCAAAATGAGAACCAGAAGCTGCGAAAGATATTTTCTGCAGAAGATGATGTGGGAGTATCCTCTTCACCTGAAGCAGGGGCTGCAGAATCATTATCATCAGAAGGCTTTATTAGAGGAAGGTCTTATAATATCCGACTTGATGATCAAGTTTTGCTTAAATTTTCTCCTAAAAATTCTGACTCAACATATTACTTCAGTGATGTGATAGGGGGTACTCTCACTTTCTTTCATGAAGAAGGAGCTAGGAGATGCCTTGAGATTTCAATAACATTGGAAACTTCCGAAACTATAAATCGGCGATTTGTTCACCCTTCTAGAAGGAATTCTCCGACAATCACTAAGGTTCAGAGTGATCATCATGAGGTTGTAGCAGATTTGGTGCAGACTAGCTTTCTTTTTTCGGTTCCCATGGATGGTCCAATGTCCTTCTCCACTCAACATGTATCTGTGCAGTGGGTTCTCCGCTTTGAATTTTTCACAACTCCAAAGCATGTAGATTGGAAAAAGTATGACCATCCTCTTCTGATTGAGGGAAGGGAAAAAACGGAATGGTTGAAGTTAAATTATGCTGAAGCTGAAATGTGTACAACTTATTGTAGCCTTTTCAATATGCTGTACAAAATATTCATAAAACAGCAGCCAGCGAAATGTGAGGATGATCATTTGTAG 1611 0.4196 MLPSRFSFFGGGDSHVSNSAPKGEELSPPTLKLETDKLVYRPGDPVVVTIQISNPSSGYSFLMERLSFEIKGIEKLDTQWFATQKPLPGSKQRRGEHAFLECSTPVLVANQIVNAGASKSYVVRMLLPSIIPPSYKGSNIRYLYYVKSAFTGGWIIFENGQSRAESKNDVTDVEVRIPLQIWINQKSITMDDDIVPLTAVQLDIFWKEMDGDADWVRANDMYDGVEEGYDSSRDDISSVSSYNPMRENLHRGFGSSLSLRSSSARSLTRDASTLEGFRTSLSSNMALPRLSVAEVLSDSGADVLSSQKSFAVVSQNENQKLRKIFSAEDDVGVSSSPEAGAAESLSSEGFIRGRSYNIRLDDQVLLKFSPKNSDSTYYFSDVIGGTLTFFHEEGARRCLEISITLETSETINRRFVHPSRRNSPTITKVQSDHHEVVADLVQTSFLFSVPMDGPMSFSTQHVSVQWVLRFEFFTTPKHVDWKKYDHPLLIEGREKTEWLKLNYAEAEMCTTYCSLFNMLYKIFIKQQPAKCEDDHL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01454 536 Pfam Rgp1 112 474 IPR014848 -
Cca01g01454 536 PANTHER REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED 15 507 IPR014848 -
Cca01g01454 536 PANTHER BNAANNG31920D PROTEIN 15 507 - -
Cca01g01454 536 SUPERFAMILY E set domains 28 154 IPR014756 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01454 K20477 - gmx:100812423 859.366