Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01452 ATGGCTTCCACACCGGGAATCCTCACGGACTGGCCATGGAAGCCTTTCGGAAACTTTAAGTACGTGGTAGTTGCTCCTTTTGTTATTCATAGCTGGTACGCAATGTTGGTGAAGGATGAGAGTGAAAGGGACATAACCAACTTTCTCATACTACCATTTTTGTTGTGGCGTATGCTTCACAATCAAATATGGATCTCTGTCTCTCGCTACCGAACAGCCAAAGGCAATGCTAGAATTGTTGACAAAGGAATTGAGTTTGATCAAGTTGACAGAGAAAGAAATTGGGATGACCAAATATTATTCAATGGGTTATTACACTACATGGCAAACTATATATTTCCAGGGGCATCACGTTTTCCATTATGGAGAACAGATGGAGTGATTATGACAATACTACTTCATATGGGACCAGTGGAATTTCTGTATTACTGGTTACATAGGGCACTTCATCACCACTTCCTATACTCTCGATATCATTCTCATCACCATTCTTCAATTGTCACAGAACCCATTACTTCTGTTACCCATCCATTTGCTGAGCACATATTATATTTTCTTCTTTTTGCAATTGCTTTGTTAATCCCTGTCTTTACAAAAACGACCTCTATGTTGGCCGTGTTTGGATATGTGACATACATTGATTTTATGAACAATATGGGTCATTGCAATTTTGAGATTGTTCCAACGTGGCTCTTTCGCATATTTCCTCCTCTCAAGTACCTCATCTACACCCCATCGTTTCACTCTTTACATCATACCCAATTCAGGACAAATTACTCTTTGTTTATGCCATTTTATGACTACATTTATGGCACCACAGACAAGACCTCAGATCAATTACATTATTCAACAAGAAAACGACAAGAAGAAATGCCAGATGTTGTGCATCTAACACACTTAACTACTCCTAAATCCATATATCATCTCAGATTTGGATTTGCTTACCTAGCCTCGAAGCCATACACACCAAAATGGTACCTTTGTTTGATGTGGCCAGTGACAGCTTGGTCTATGATTCTTACATGGGCTTATGGCCGTACATTCATTGTGGAGCGAAATAATTTTGACAAACTCAAGTTACAAACTTGGGCAATACCCAAATATAAATTCCAATACATTTCGCAATCGCAAAAAATGACCATCAACAAAATGATAGAGGAAGCAATACTAGATGCAGATAGAAAAGGCATAAAAGTGTTGAGCCTAGGCCTTATGAATCAAGGAGAGGAGCTTAACATCTATGGAGGGCTATATGTTAATAGGCATCCTAAGCTAAAAGTTAAGGTTGTTGATGGAAGCAGCCTTGCCGTTGGTATTGTTCTTAACAACATTCCTAAAGGAACAACTCAAGTATTACTTAGGGGAAAACTCACTAAGGTTACTTATGCTCTTGCCTACACATTGTGTCAACAAGGCATTAAGGTTGCTACAATGCACAAGGATGATTATGGGAGACTTCAAAGTTCATCCAATAATTTTGAAACTAATTTGATCATTGCAAAAAGCTACACCCAAATGACTTGGTTAGTTGGAGATGAACTAACCGAAGAGGAACAATTGAAGGCACCCAAAGGAACATTATTTATTCCATACTCACAATTTCAACCAAAGAAATATCGGAAAGATTGTTCCTATCATTGGACTCCAGCAATGTTAATTCCCAAATCTATTGAAAATGTTCATTCTTGTGAGAATTGGTTGCCAAGGAGGGTAATGAGTGCATCACGCATAGCTGGAATATTGCATTCTTTAGAAAGTTGGAATGAACATGAATGCAACTACACAATGCATAGCATAGAAAAAGTTTGGGATTCAGCTCTTCAACATGGATTCCGACCTCTTACTATGTCAATCCAAtag 1860 0.3833 MASTPGILTDWPWKPFGNFKYVVVAPFVIHSWYAMLVKDESERDITNFLILPFLLWRMLHNQIWISVSRYRTAKGNARIVDKGIEFDQVDRERNWDDQILFNGLLHYMANYIFPGASRFPLWRTDGVIMTILLHMGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVTHPFAEHILYFLLFAIALLIPVFTKTTSMLAVFGYVTYIDFMNNMGHCNFEIVPTWLFRIFPPLKYLIYTPSFHSLHHTQFRTNYSLFMPFYDYIYGTTDKTSDQLHYSTRKRQEEMPDVVHLTHLTTPKSIYHLRFGFAYLASKPYTPKWYLCLMWPVTAWSMILTWAYGRTFIVERNNFDKLKLQTWAIPKYKFQYISQSQKMTINKMIEEAILDADRKGIKVLSLGLMNQGEELNIYGGLYVNRHPKLKVKVVDGSSLAVGIVLNNIPKGTTQVLLRGKLTKVTYALAYTLCQQGIKVATMHKDDYGRLQSSSNNFETNLIIAKSYTQMTWLVGDELTEEEQLKAPKGTLFIPYSQFQPKKYRKDCSYHWTPAMLIPKSIENVHSCENWLPRRVMSASRIAGILHSLESWNEHECNYTMHSIEKVWDSALQHGFRPLTMSIQ 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01452 619 Pfam Fatty acid hydroxylase 133 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
Cca01g01452 619 PANTHER STEROL DESATURASE 1 617 - -
Cca01g01452 619 Pfam WAX2 C-terminal domain 451 613 IPR021940 -
Cca01g01452 619 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 1 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01452 Cca-Chr1 30185340 30193054 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01452 1 617 Lipid Metabolism Gene Families AT1G02190 57.097 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01452 K15404 - gmx:100805835 1042.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01452 01 30185340 30193054 Cca01g01452 01 30185340 30193054 ECH