Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01448 ATGGCCTCAAGGCCTGGAATCCTCACAGATTGGCCATGGAAGCCTCTTGGAAGCTTTAAGTATCTGTTGGTAGCTCCTTGGGCCATTCATAGCTTCTATTCTCTGGTGGTGGAGGAAAAGAGTGAAAGAAGGGACATAAGCACCTTTCTCATATTACCTTTTCTGCTTTGGCGTATGCTTCATAACCAGATATGGATCTCTCTCTCCCGTTACCGAACTGCTAAAGGCAACACTAGAATTGTTGACAAGGGGATTGAGTTTGATCAAGTTGATAGAGAAAGAGATTGGGATGACCAAATATTGTTCAATGGGTTACTATACTACTTGGGATGCTACACAATACCCGGTGCAACTCATCTTCCACTGTGGAGAACCGATGGAGTAGTAATGACAATATTACTTCACATGGGACCAGTAGAGTTTCTTTATTATTGGTTACACAGAGCACTTCATCACCACTTTCTCTACTCCAGATACCACTCTCACCACCACTCTTCCATAGTCACTGAACCTATAACGTCTGTGATCCATCCATTTGGTGAACACATATTATACTTCCTTCTCTTTGCAATACCCAAGTTAACTATAGTCTTCACAAGAACAGCTTCTGTTGGAGCCATGGTTGCATATGTCACTTACATTGATTTCATGAACAATATGGGTCATTGCAACTTTGAGGTGGTCCCCAAGTGGCTCTTTGATGTCTTTCCTCCACTCAAATATCTGATGTACACCCCATCGTTTCATTCTCTACACCATACTCAGTTTAGAACAAACTACTCCCTGTTTATGCCACTTTATGACTACATCTATGGCACCACGGACAAGGCTTCAGATAAATTACATGAATCATCATTAAAACGAGAGGAAGAAATTCCAGATGTTGTACACTTAACACATCTCACAACCCCTGAATCCATCTATTATCTTAGGTTTGGATTTGCTTACTTGGCCTCAAAACCTTACACGTCAAAATGGTACCTTTGTTTGATGTGGCCTATAACAGCTTGGTCCATGATCCTTACATGGGTCTATGGTCGTACATTCATTGTTGAGGGAAATCGCTTTGACAAACTTAAGCTGCAAACTTGGGCAATACCCAAATTCAGTCTCCAATACTTCTTGCAATCTCAAAAAGTGACAATCAACACAATGATAGAGGAAGCAATACTTGATGCGGATAAAAAAAGCATAAAAGTGTTGAGCTTAGGTCTTAGGAATCAAGGAGAGGACCTTAACATCTATGGAAGCTTATATGTTAGTAGGCATCCAAAGTTAAAAGTTAAGATTGTAGATGGTAGTAGCCTTGTGGTTGCTATTGTTCTAAACAACATTCCTAAAGGAACAACTCAAGTATTACTTAGAGGTAAACTCTCTAAGGTTGCTTATGCTCTTGCCTTCACACTGTGTCAACAAGGTGTTCAGGTTGTGACTTTGCATGAGAATGATTACGTGAGGCTCAAAAAGTCATTCACTGGCTCAGAAACCAATTTGGCCTTTACTAAAAGCTACACACAGACGACATGGTTAGTAGGAGATGATTTGACTGAAGAAGAACAACTAAAGGCACCCAAAGGAACATTATTTATTCCATATACACAATTTCCACCAAAGAAATATCGCAAGGACTGCTCCTACCATTGCACTCCAGCAATGTTAGCTCCATGCTCCATTGAAAATGTCCACTCTTGTGAGGATTGGTTGCCAAGGAGGGTAATGAGTGCATGGCGCATAGCGGGGATAGTACATTGTCTAGAAGGATGGAGTGCACATGAGTGTGGTCACACAATGCATAATGTTGACAAAGTTTGGCATTCAACACTTCAACATGGGTTCCAACCTCTTTCGGTGCCACTCAAAGAATTAGCTCATTATTAA 1878 0.4095 MASRPGILTDWPWKPLGSFKYLLVAPWAIHSFYSLVVEEKSERRDISTFLILPFLLWRMLHNQIWISLSRYRTAKGNTRIVDKGIEFDQVDRERDWDDQILFNGLLYYLGCYTIPGATHLPLWRTDGVVMTILLHMGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFGEHILYFLLFAIPKLTIVFTRTASVGAMVAYVTYIDFMNNMGHCNFEVVPKWLFDVFPPLKYLMYTPSFHSLHHTQFRTNYSLFMPLYDYIYGTTDKASDKLHESSLKREEEIPDVVHLTHLTTPESIYYLRFGFAYLASKPYTSKWYLCLMWPITAWSMILTWVYGRTFIVEGNRFDKLKLQTWAIPKFSLQYFLQSQKVTINTMIEEAILDADKKSIKVLSLGLRNQGEDLNIYGSLYVSRHPKLKVKIVDGSSLVVAIVLNNIPKGTTQVLLRGKLSKVAYALAFTLCQQGVQVVTLHENDYVRLKKSFTGSETNLAFTKSYTQTTWLVGDDLTEEEQLKAPKGTLFIPYTQFPPKKYRKDCSYHCTPAMLAPCSIENVHSCEDWLPRRVMSAWRIAGIVHCLEGWSAHECGHTMHNVDKVWHSTLQHGFQPLSVPLKELAHY 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01448 625 Pfam Fatty acid hydroxylase 134 273 IPR006694 GO:0005506|GO:0008610|GO:0016491
Cca01g01448 625 PANTHER STEROL DESATURASE 1 618 - -
Cca01g01448 625 Pfam WAX2 C-terminal domain 452 614 IPR021940 -
Cca01g01448 625 PANTHER FATTY ACID HYDROXYLASE SUPERFAMILY PROTEIN 1 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01448 Cca-Chr1 30141642 30153258 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01448 1 615 Lipid Metabolism Gene Families AT1G02190 58.880 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01448 K15404 - gmx:100818020 1168.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01448 01 30141642 30153258 Cca01g01448 01 30141642 30153258 ECH